| Protein: | DMA1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 416 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DMA1.
| Description | E-value | Query Range |
Subject Range |
|
|
1.0E-66 | [1..416] | [1..416] |
|
|
2.0E-39 | [9..382] | [214..591] |
|
|
3.0E-32 | [5..372] | [326..679] |
|
|
3.0E-30 | [155..393] | [28..258] |
|
|
3.0E-28 | [5..273] | [34..284] |
|
|
3.0E-27 | [9..382] | [214..598] |
|
Region A: Residues: [1-118] |
1 11 21 31 41 51
| | | | | |
1 MSTNTVPSSP PNQTPPAASG IATSHDHTKF NNPIRLPISI SLTINDTPNN NSNNNSVSNG 60
61 LGILPSRTAT SLVVANNGSA NGNVGATAAA AATVETNTAP AVNTTKSIRH FIYPPNQV
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.274 | b.71.1 | Glycosyl hydrolase domain |
| View | Download | 0.249 | a.39.2 | Insect pheromon/odorant-binding proteins |
|
Region A: Residues: [119-326] |
1 11 21 31 41 51
| | | | | |
1 NQTEFSLDIH LPPNTSLPER IDQSTLKRRM DKHGLFSIRL TPFIDTSSTS VANQGLFFDP 60
61 IIRTAGAGSQ IIIGRYTERV REAISKIPDQ YHPVVFKSKV ISRTHGCFKV DDQGNWFLKD 120
121 VKSSSGTFLN HQRLSSASTT SKDYLLHDGD IIQLGMDFRG GTEEIYRCVK MKIELNKSWK 180
181 LKANAFNKEA LSRIKNLQKL TTGLEQED
|
|
Region B: Residues: [380-416] |
1 11 21 31 41 51
| | | | | |
1 LESESESEFE NEDEDEPDIE MDIDMEINNN LGVRLVD
|
| Detection Method: | |
| Confidence: | 6.0 |
| Match: | 1fbvA_ |
| Description: | Cbl; N-terminal domain of cbl (N-cbl); CBL |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| cytoskeletal protein binding | 3.49668552859347 | bayes_pls_golite062009 |
| motor activity | 3.25814691068414 | bayes_pls_golite062009 |
| binding | 2.69791297400248 | bayes_pls_golite062009 |
| tubulin binding | 2.51210014078446 | bayes_pls_golite062009 |
| actin binding | 2.38676888633305 | bayes_pls_golite062009 |
| ubiquitin-protein ligase activity | 2.20438586677555 | bayes_pls_golite062009 |
| microtubule binding | 2.17136406283012 | bayes_pls_golite062009 |
| protein binding | 2.14586566310919 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 1.97264874084155 | bayes_pls_golite062009 |
| molecular adaptor activity | 1.33740973673697 | bayes_pls_golite062009 |
| structural constituent of muscle | 1.30669499755555 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 1.26357595913158 | bayes_pls_golite062009 |
| SH3/SH2 adaptor activity | 1.2323381312171 | bayes_pls_golite062009 |
| microfilament motor activity | 1.0725773039399 | bayes_pls_golite062009 |
| signal transducer activity | 0.999269271132931 | bayes_pls_golite062009 |
| molecular transducer activity | 0.999269271132931 | bayes_pls_golite062009 |
| protein binding, bridging | 0.83823250804321 | bayes_pls_golite062009 |
| actin filament binding | 0.836375875773328 | bayes_pls_golite062009 |
| structural molecule activity | 0.800850121197479 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 0.748479359639348 | bayes_pls_golite062009 |
| kinase activity | 0.662911740280035 | bayes_pls_golite062009 |
| N-terminal myristoylation domain binding | 0.63045154489014 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.493362981045534 | bayes_pls_golite062009 |
| G-protein beta/gamma-subunit binding | 0.487272307313601 | bayes_pls_golite062009 |
| enzyme regulator activity | 0.456661966897198 | bayes_pls_golite062009 |
| ligase activity, forming carbon-nitrogen bonds | 0.452350351194157 | bayes_pls_golite062009 |
| protein phosphorylated amino acid binding | 0.43808715710519 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.382055332967642 | bayes_pls_golite062009 |
| enzyme activator activity | 0.369738999181035 | bayes_pls_golite062009 |
| actin-dependent ATPase activity | 0.3688716707761 | bayes_pls_golite062009 |
| pyrophosphatase activity | 0.321819287555157 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 0.30564870400158 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 0.305174269756747 | bayes_pls_golite062009 |
| kinase regulator activity | 0.262406945568467 | bayes_pls_golite062009 |
| transferase activity | 0.169970258787201 | bayes_pls_golite062009 |
| phosphoprotein binding | 0.16798254471727 | bayes_pls_golite062009 |
| myosin binding | 0.125186564742711 | bayes_pls_golite062009 |
| structural constituent of cytoskeleton | 0.116648335890738 | bayes_pls_golite062009 |
| protein kinase activity | 0.0865488336042732 | bayes_pls_golite062009 |
|
Region A: Residues: [327-379] |
1 11 21 31 41 51
| | | | | |
1 CSICLNKIKP CQAIFISPCA HSWHFHCVRR LVIMNYPQFM CPNCRTNCDL ETT
|
| Detection Method: | |
| Confidence: | 6.0 |
| Match: | 1fbvA_ |
| Description: | Cbl; N-terminal domain of cbl (N-cbl); CBL |
| Matching Structure (courtesy of the PDB): |
|
