YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|9758583, gi|2...

General Information:
Name(s) found: gi|9758583 [NCBI NR]
gi|28416527 [NCBI NR]
gi|227206274 [NCBI NR]
gi|18087616 [NCBI NR]
gi|15239131 [NCBI NR]
Description(s) found:
Found 15 descriptions.
SHOW ALL
  • gi|9758583|dbj|BAB09196.1| unnamed protein product [Arabidopsis thaliana] [NCBI NR]
  • gi|28416527|gb|AAO42794.1| At5g42940/MBD2_14 [Arabidopsis thaliana] [NCBI NR]
  • gi|227206274|dbj|BAH57192.1| AT5G42940 [Arabidopsis thaliana] [NCBI NR]
  • gi|18087616|gb|AAL58938.1|AF462851_1 AT5g42940/MBD2_14 [Arabidopsis thaliana] [NCBI NR]
  • gi|15239131|ref|NP_199108.1| zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 691 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: zinc ion binding [IEA][ISS]
    protein binding [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQGERASLGY LSEALNFEHG SSSSNGVIDH WENIHSLGDN DLQDYMIANS ESNTSLANSV  60
   61 YHEQQGLRRF SLGEASSSGT KDEASSHNEQ RMETRCFDGR GNEIIDLDPV FAQPSGTNQP 120
  121 VQNVNLNAEY IEIHEDINPY RGRSGFIEAN GPGTRVSQPG RSFEENGVGT GSSVEGRRAS 180
  181 CKRKALEGSI SQSSSGGYHD FQRGESSSWT PGSTVFRPGN GLNISGSLDN GPRGMVSGTV 240
  241 PNFPVSAPNF PVSAIAESSS RNICVRSNPS DHQETVNPST FAAGTVVRRP VPPSQLNLSR 300
  301 HLPADQHSLD LRPGQSFVVS RNPNSTPVSI PPGSRTMLPP FRWTGSSLVG GTSNSTAPVE 360
  361 RNLHLDETRS RSIPGNTLEI PMFAAPEVGN FARSQSSRNV TNGNLNSASS VSRTGSTTSV 420
  421 PPPPPPSSNL AWTSYQNSPH YQRRRTERSE LARRSLLSSL AADATNQRSG DHPTLRSLAP 480
  481 PASSDGLVLQ PGGDNSQMHN RAYSRAGPLF DRQGDSVVGI PHPLRALAAA SRGRSRLMVS 540
  541 QMQNVLDVMR RDANNNNLRL EDVMLLNHSV LFDGATGHDR YRDMRLDVDN MSYEELLALE 600
  601 ERIGDVCTGV NEETISNRLK QRKYKSNTKS PQDAEPCCVC QEEYTEGEDM GTLECGHEFH 660
  661 SQCIKEWLKQ KNLCPICKTT GLNTAKKRRI A

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..236] PSI-BLAST 7.045757 RBP1
    2 View Details [237..356] MSA 1.273986 View MSA. No confident structure predictions are available.
    3 View Details [357..587] deduced N/A No confident structure predictions are available.
    4 View Details [588..691] PSI-BLAST 12.221849 Solution structure of RING finger in RING finger protein 38


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle