| Protein: | CSE1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 960 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CSE1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [2..957] | [6..971] |
|
|
0.0 | [2..957] | [6..971] |
|
|
0.0 | [1..960] | [1..960] |
|
|
0.0 | [2..957] | [6..971] |
|
|
0.0 | [2..951] | [6..962] |
|
|
0.0 | [7..956] | [11..963] |
|
|
0.0 | [4..953] | [1..960] |
|
|
0.0 | [4..956] | [8..974] |
|
Region A: Residues: [1-220] |
1 11 21 31 41 51
| | | | | |
1 MSDLETVAKF LAESVIASTA KTSERNLRQL ETQDGFGLTL LHVIASTNLP LSTRLAGALF 60
61 FKNFIKRKWV DENGNHLLPA NNVELIKKEI VPLMISLPNN LQVQIGEAIS SIADSDFPDR 120
121 WPTLLSDLAS RLSNDDMVTN KGVLTVAHSI FKRWRPLFRS DELFLEIKLV LDVFTAPFLN 180
181 LLKTVDEQIT ANENNKASLN ILFDVLLVLI KLYYDFNCQD
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
| Term | Confidence | Notes |
| protein transporter activity | 4.58709163830613 | bayes_pls_golite062009 |
| nuclear export signal receptor activity | 3.48172991171337 | bayes_pls_golite062009 |
| binding | 3.0667965351474 | bayes_pls_golite062009 |
| protein transmembrane transporter activity | 2.74547353635661 | bayes_pls_golite062009 |
| transporter activity | 2.48700774379895 | bayes_pls_golite062009 |
| nucleic acid binding | 2.34284977509828 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 2.26725422172281 | bayes_pls_golite062009 |
| nuclear localization sequence binding | 1.91487015967262 | bayes_pls_golite062009 |
| transcription regulator activity | 1.76231475025891 | bayes_pls_golite062009 |
| protein binding | 1.73688475473996 | bayes_pls_golite062009 |
| DNA binding | 1.62032607987786 | bayes_pls_golite062009 |
| molecular transducer activity | 1.51103985174196 | bayes_pls_golite062009 |
| signal transducer activity | 1.51103985174196 | bayes_pls_golite062009 |
| transmembrane transporter activity | 1.28481004323799 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 1.09652988954158 | bayes_pls_golite062009 |
| transcription factor activity | 0.923253759652909 | bayes_pls_golite062009 |
| structural molecule activity | 0.908029258648777 | bayes_pls_golite062009 |
| translation initiation factor activity | 0.83079633551839 | bayes_pls_golite062009 |
| translation regulator activity | 0.82193201542158 | bayes_pls_golite062009 |
| translation factor activity, nucleic acid binding | 0.803700928110921 | bayes_pls_golite062009 |
| clathrin binding | 0.70539170437469 | bayes_pls_golite062009 |
| signal sequence binding | 0.57106697498903 | bayes_pls_golite062009 |
| mRNA binding | 0.46864854653143 | bayes_pls_golite062009 |
| RNA binding | 0.40024158562931 | bayes_pls_golite062009 |
| importin-alpha export receptor activity | 0.259676026705859 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 0.252495966234234 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.248585912061178 | bayes_pls_golite062009 |
| primary active transmembrane transporter activity | 0.226380819487924 | bayes_pls_golite062009 |
| P-P-bond-hydrolysis-driven transmembrane transporter activity | 0.217517113570989 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | 0.178770060806735 | bayes_pls_golite062009 |
| ATPase activity, coupled to movement of substances | 0.175241020572885 | bayes_pls_golite062009 |
| ATPase activity, coupled to transmembrane movement of substances | 0.174922130116569 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.100181463251306 | bayes_pls_golite062009 |
| pyrophosphatase activity | 0.0635404099346928 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 0.0548082069333885 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 0.052195223119721 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 0.0405268469927988 | bayes_pls_golite062009 |
| transcription activator activity | 0.0232727461674547 | bayes_pls_golite062009 |
|
Region A: Residues: [221-811] |
1 11 21 31 41 51
| | | | | |
1 IPEFFEDNIQ VGMGIFHKYL SYSNPLLEDP DETEHASVLI KVKSSIQELV QLYTTRYEDV 60
61 FGPMINEFIQ ITWNLLTSIS NQPKYDILVS KSLSFLTAVT RIPKYFEIFN NESAMNNITE 120
121 QIILPNVTLR EEDVELFEDD PIEYIRRDLE GSDTDTRRRA CTDFLKELKE KNEVLVTNIF 180
181 LAHMKGFVDQ YMSDPSKNWK FKDLYIYLFT ALAINGNITN AGVSSTNNLL NVVDFFTKEI 240
241 APDLTSNNIP HIILRVDAIK YIYTFRNQLT KAQLIELMPI LATFLQTDEY VVYTYAAITI 300
301 EKILTIRESN TSPAFIFHKE DISNSTEILL KNLIALILKH GSSPEKLAEN EFLMRSIFRV 360
361 LQTSEDSIQP LFPQLLAQFI EIVTIMAKNP SNPRFTHYTF ESIGAILNYT QRQNLPLLVD 420
421 SMMPTFLTVF SEDIQEFIPY VFQIIAFVVE QSATIPESIK PLAQPLLAPN VWELKGNIPA 480
481 VTRLLKSFIK TDSSIFPDLV PVLGIFQRLI ASKAYEVHGF DLLEHIMLLI DMNRLRPYIK 540
541 QIAVLLLQRL QNSKTERYVK KLTVFFGLIS NKLGSDFLIH FIDEVQDGLF Q
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [812-960] |
1 11 21 31 41 51
| | | | | |
1 QIWGNFIITT LPTIGNLLDR KIALIGVLNM VINGQFFQSK YPTLISSTMN SIIETASSQS 60
61 IANLKNDYVD LDNLEEISTF GSHFSKLVSI SEKPFDPLPE IDVNNGVRLY VAEALNKYNA 120
121 ISGNTFLNTI LPQLTQENQV KLNQLLVGN
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
