Protein: | FLC3 |
Organism: | Saccharomyces cerevisiae |
Length: | 802 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FLC3.
Description | E-value | Query Range |
Subject Range |
|
0.0 | [1..802] | [1..802] |
|
0.0 | [19..647] | [393..1052] |
|
0.0 | [19..647] | [15..674] |
|
0.0 | [4..712] | [1..694] |
Region A: Residues: [1-192] |
1 11 21 31 41 51 | | | | | | 1 MRFLQVYKSS ALIGLIILLA SKVNLAEAKR KLVATSLVTC MENSQLSANS FDVVFNPDDR 60 61 SLHYDLDMST QIDSYIFADI DVYAYGFKII TKNVDLCSIN WKQFCPVHPG NIQIDSIEYI 120 121 SSEYVNEIPG IAYQVPDIDA YARVKITNNV SEYLACIQIY FSNGKTVSQI GVKWATAVVA 180 181 GIGLLLSAIL ST |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
View | Download | 0.437 | 0.788 | mitochondrion | c.3.1 | FAD/NAD(P)-binding domain |
View | Download | 0.510 | 0.000 | mitochondrion | c.101.1 | Undecaprenyl diphosphate synthase |
View | Download | 0.483 | N/A | N/A | c.72.2 | MurD-like peptide ligases, catalytic domain |
View | Download | 0.431 | N/A | N/A | e.7.1 | Carbohydrate phosphatase |
View | Download | 0.427 | N/A | N/A | d.152.1 | Aldehyde ferredoxin oxidoreductase, N-terminal domain |
View | Download | 0.417 | N/A | N/A | d.153.1 | N-terminal nucleophile aminohydrolases (Ntn hydrolases) |
View | Download | 0.416 | N/A | N/A | b.21.1 | Virus attachment protein globular domain |
View | Download | 0.371 | N/A | N/A | b.60.1 | Lipocalins |
View | Download | 0.345 | N/A | N/A | b.97.1 | Anemone pore-forming cytolysin |
View | Download | 0.341 | N/A | N/A | d.21.1 | Diaminopimelate epimerase-like |
View | Download | 0.329 | N/A | N/A | c.23.9 | Cutinase-like |
View | Download | 0.320 | N/A | N/A | d.110.2 | GAF domain-like |
View | Download | 0.305 | N/A | N/A | e.7.1 | Carbohydrate phosphatase |
View | Download | 0.295 | N/A | N/A | b.60.1 | Lipocalins |
View | Download | 0.293 | N/A | N/A | b.60.1 | Lipocalins |
View | Download | 0.272 | N/A | N/A | d.20.1 | UBC-like |
View | Download | 0.243 | N/A | N/A | d.20.1 | UBC-like |
View | Download | 0.241 | N/A | N/A | c.1.1 | Triosephosphate isomerase (TIM) |
View | Download | 0.235 | N/A | N/A | d.110.1 | Profilin (actin-binding protein) |
View | Download | 0.233 | N/A | N/A | b.60.1 | Lipocalins |
View | Download | 0.221 | N/A | N/A | e.7.1 | Carbohydrate phosphatase |
View | Download | 0.213 | N/A | N/A | a.93.1 | Heme-dependent peroxidases |
View | Download | 0.206 | N/A | N/A | e.7.1 | Carbohydrate phosphatase |
View | Download | 0.202 | N/A | N/A | c.97.1 | Cytidine deaminase-like |
Term | Confidence | Notes |
potassium channel activity | 5.34623321286043 | bayes_pls_golite062009 |
voltage-gated potassium channel activity | 5.3457739160783 | bayes_pls_golite062009 |
metal ion transmembrane transporter activity | 5.29167837952147 | bayes_pls_golite062009 |
voltage-gated cation channel activity | 4.9171616807315 | bayes_pls_golite062009 |
cation channel activity | 4.79161681210355 | bayes_pls_golite062009 |
voltage-gated ion channel activity | 4.75442765649412 | bayes_pls_golite062009 |
voltage-gated channel activity | 4.73153984947535 | bayes_pls_golite062009 |
cation transmembrane transporter activity | 4.54873661177894 | bayes_pls_golite062009 |
ion transmembrane transporter activity | 4.46212583884101 | bayes_pls_golite062009 |
ion channel activity | 4.19986580228506 | bayes_pls_golite062009 |
inward rectifier potassium channel activity | 4.11043455536373 | bayes_pls_golite062009 |
gated channel activity | 4.10310997393268 | bayes_pls_golite062009 |
substrate-specific channel activity | 4.09106677594218 | bayes_pls_golite062009 |
channel activity | 4.07346819712136 | bayes_pls_golite062009 |
passive transmembrane transporter activity | 4.07346819712136 | bayes_pls_golite062009 |
substrate-specific transmembrane transporter activity | 4.06857483006075 | bayes_pls_golite062009 |
ligand-gated ion channel activity | 3.52286634234959 | bayes_pls_golite062009 |
ligand-gated channel activity | 3.52286634234959 | bayes_pls_golite062009 |
transporter activity | 2.35657262831396 | bayes_pls_golite062009 |
transmembrane transporter activity | 2.25147059981728 | bayes_pls_golite062009 |
substrate-specific transporter activity | 2.22751878261824 | bayes_pls_golite062009 |
binding | 1.96281708074635 | bayes_pls_golite062009 |
G-protein activated inward rectifier potassium channel activity | 1.65070971324325 | bayes_pls_golite062009 |
hydrolase activity | 1.63153428386052 | bayes_pls_golite062009 |
protein binding | 1.30086551295862 | bayes_pls_golite062009 |
ATP-activated inward rectifier potassium channel activity | 1.18849851204642 | bayes_pls_golite062009 |
molecular transducer activity | 0.525578079825295 | bayes_pls_golite062009 |
signal transducer activity | 0.525578079825295 | bayes_pls_golite062009 |
clathrin binding | 0.50269928917354 | bayes_pls_golite062009 |
cytoskeletal protein binding | 0.448241458604601 | bayes_pls_golite062009 |
actin binding | 0.328787215513486 | bayes_pls_golite062009 |
Region A: Residues: [193-301] |
1 11 21 31 41 51 | | | | | | 1 FGNSTAASHI SANTMSLFLY FQSVVVVAMQ HVHRVPPIAA AWAENLVWSM GLIRISFMQR 60 61 IFRWYVQSTG GTPSLYLTST SMSVLAQRSW QYLMELPLIK RATNVLYGN |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [302-579] |
1 11 21 31 41 51 | | | | | | 1 ANTLIFRGIK RLGYKMGIEN TSIVCTGFTF FVLCGYVLAG FIIVFKCCVE LATRLGWIQK 60 61 ARFWEFRKQW RMILKGALLR YIYIGFVQLT ILSFWEFTER DSPAVIVIAC LFILLSCGLM 120 121 LWAAWRTVFF ARRSVALYNN PAALLYGDEY VLHKYGFFYT MFNANHYWWN IVLLSYIFVK 180 181 SLLVGFAQAS GQTQVLFMFI LDLFYFVAII YYKPYLDRPT NIMNILIATV TVVNSFLFMF 240 241 FSDLFNQSYK VAAIMGWIFF IMNAAFSFIL LMMILAFA |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [580-749] |
1 11 21 31 41 51 | | | | | | 1 GMMLFSKNPD LRFKPAKDDR TSFQRNTMKP EGTVNRSVAN ELLALGNVAK DHDDNSDYES 60 61 NDTGVNDELK QAQDETTPTT VTSSDDNKPT FSEKILSKFS RPKNENASTD ALRVEAPKQQ 120 121 TFPHNLTNLS RENLSTLGSK PYPGHTRSQS DAHNGLINSF EEEDTSSNTD |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [750-802] |
1 11 21 31 41 51 | | | | | | 1 PFHDSTEGDL LDTSSSDGGF RSQNYVRDDS INSLGNNKQP LRKPPGFFDE GFM |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
MCM Score |
SCOP Match |
SCOP Description | ||
View | Download | 0.393 | a.60.1 | SAM/Pointed domain |
View | Download | 0.346 | a.4.1 | Homeodomain-like |
View | Download | 0.260 | d.48.1 | RecA protein, C-terminal domain |
View | Download | 0.309 | a.4.1 | Homeodomain-like |
View | Download | 0.246 | a.36.1 | Signal peptide-binding domain |
View | Download | 0.232 | a.144.1 | PABC (PABP) domain |
View | Download | 0.218 | a.60.4 | DNA repair protein Rad51, N-terminal domain |