| Protein: | UBC6 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 250 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for UBC6.
| Description | E-value | Query Range |
Subject Range |
|
|
9.0E-69 | [1..250] | [1..250] |
|
|
6.0E-60 | [1..249] | [1..236] |
|
|
1.0E-59 | [2..250] | [9..254] |
|
|
6.0E-59 | [1..249] | [1..236] |
|
|
1.0E-57 | [1..249] | [1..234] |
|
|
4.0E-57 | [1..249] | [1..240] |
|
|
5.0E-57 | [1..250] | [1..253] |
|
Region A: Residues: [1-178] |
1 11 21 31 41 51
| | | | | |
1 MATKQAHKRL TKEYKLMVEN PPPYILARPN EDNILEWHYI ITGPADTPYK GGQYHGTLTF 60
61 PSDYPYKPPA IRMITPNGRF KPNTRLCLSM SDYHPDTWNP GWSVSTILNG LLSFMTSDEA 120
121 TTGSITTSDH QKKTLARNSI SYNTFQNVRF KLIFPEVVQE NVETLEKRKL DEGDAANT
|
| Detection Method: |  |
| Confidence: | 193.917458 |
| Match: | 1qcqA_ |
| Description: | Ubiquitin conjugating enzyme, UBC |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| small conjugating protein ligase activity | 6.4298500488854 | bayes_pls_golite062009 |
| ubiquitin-protein ligase activity | 6.42696952904883 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 5.49452788881858 | bayes_pls_golite062009 |
| ligase activity, forming carbon-nitrogen bonds | 3.8110076681004 | bayes_pls_golite062009 |
| ligase activity | 1.88059319399119 | bayes_pls_golite062009 |
| catalytic activity | 0.891402822028799 | bayes_pls_golite062009 |
| protein binding | 0.749259816502314 | bayes_pls_golite062009 |
| binding | 0.7313332818323 | bayes_pls_golite062009 |
| NEDD8 ligase activity | 0.715654744941217 | bayes_pls_golite062009 |
| SUMO ligase activity | 0.452109988422698 | bayes_pls_golite062009 |
| protein serine/threonine kinase activity | 0.182854082413338 | bayes_pls_golite062009 |
| protein kinase activity | 0.157252474301695 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 0.133142640608253 | bayes_pls_golite062009 |
| kinase activity | 0.0500350353657541 | bayes_pls_golite062009 |
|
Region A: Residues: [179-250] |
1 11 21 31 41 51
| | | | | |
1 GDETEDPFTK AAKEKVISLE EILDPEDRIR AEQALRQSEN NSKKDGKEPN DSSSMVYIGI 60
61 AIFLFLVGLF MK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
