Protein Overview: UBC6_YEAST

General Information:
Name(s) found:	UBC6_YEAST [Swiss-Prot]
Description(s) found:	Ubiquitin-conjugating enzyme E2 6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=UBC6 PE=1 SV=1 [Swiss-Prot]
Organism:	Saccharomyces cerevisiae S288c
Length:	250 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	NONE FOUND
Molecular Function:	NONE FOUND

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATKQAHKRL TKEYKLMVEN PPPYILARPN EDNILEWHYI ITGPADTPYK GGQYHGTLTF  60
   61 PSDYPYKPPA IRMITPNGRF KPNTRLCLSM SDYHPDTWNP GWSVSTILNG LLSFMTSDEA 120
  121 TTGSITTSDH QKKTLARNSI SYNTFQNVRF KLIFPEVVQE NVETLEKRKL DEGDAANTGD 180
  181 ETEDPFTKAA KEKVISLEEI LDPEDRIRAE QALRQSENNS KKDGKEPNDS SSMVYIGIAI 240
  241 FLFLVGLFMK

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data

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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..178]	PSI-BLAST	193.917458	Ubiquitin conjugating enzyme, UBC
2	View Details	[179..250]	deduced	N/A	No confident structure predictions are available.

Functions predicted (by domain):

#

Gene Ontology predictions

1

Term	Confidence	Notes
small conjugating protein ligase activity	6.4298500488854	bayes_pls_golite062009
ubiquitin-protein ligase activity	6.42696952904883	bayes_pls_golite062009
acid-amino acid ligase activity	5.49452788881858	bayes_pls_golite062009
ligase activity, forming carbon-nitrogen bonds	3.8110076681004	bayes_pls_golite062009
ligase activity	1.88059319399119	bayes_pls_golite062009
catalytic activity	0.891402822028799	bayes_pls_golite062009
protein binding	0.749259816502314	bayes_pls_golite062009
binding	0.7313332818323	bayes_pls_golite062009
NEDD8 ligase activity	0.715654744941217	bayes_pls_golite062009
SUMO ligase activity	0.452109988422698	bayes_pls_golite062009
protein serine/threonine kinase activity	0.182854082413338	bayes_pls_golite062009
protein kinase activity	0.157252474301695	bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor	0.133142640608253	bayes_pls_golite062009
kinase activity	0.0500350353657541	bayes_pls_golite062009

2

No functions predicted.

Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

Philius Transmembrane Prediction:

[View Details]

Source: Reynolds et al. 2008. Manuscript submitted

Philius confidence legend

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