| Protein: | IMB2_SCHPO |
| Organism: | Schizosaccharomyces pombe 972h- |
| Length: | 910 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for IMB2_SCHPO.
| Description | E-value | Query Range |
Subject Range |
|
|
514.0 | [0..6] | [910..211] |
|
|
513.0 | [0..3] | [910..247] |
|
|
506.0 | [0..6] | [910..176] |
|
|
505.0 | [0..6] | [910..167] |
|
|
488.0 | [0..5] | [910..38] |
|
|
486.0 | [0..6] | [910..5] |
|
|
482.0 | [0..6] | [910..3] |
|
|
481.0 | [0..3] | [910..10] |
|
Region A: Residues: [1-910] |
1 11 21 31 41 51
| | | | | |
1 MGDNPWVLQE QVLVELSEVI KNSLSENSQT RNAALNLLEK AKDIPDLNNY LTCILINATE 60
61 LSVSIRSAAG LLLKNNVRVS SLESGSGLQS LDYTKSTVIR GLCDPEQLIR GISGNVITTI 120
121 ISRWGISTWP EVLPQLMEML SSPASTTQEG AFSALTKICE DSAQELDRDF NGTRPLDFMI 180
181 PRFIELARHE NPKIRTDALF CLNQFVLIQS QSLYAHIDTF LETCYALATD VSPNVRKNVC 240
241 QALVYLLDVR PDKIAPSLGS IVEYMLYSTQ DSDQNVALEA CEFWLAIAEQ PDLCSALGPY 300
301 LDKIVPMLLQ GMVYSDMDLL LLGNDADDYD VEDREEDIRP QHAKGKSRIT LNTQGPITQQ 360
361 GSSNADADEL EDEDEDDDEF DEDDDAFMDW NLRKCSAAAL DVLSSFWKQR LLEIILPHLK 420
421 QSLTSEDWKV QEAGVLAVGA IAEGCMDGMV QYLPELYPYF LSLLDSKKPL VRTITCWTLG 480
481 RYSKWASCLE SEEDRQKYFV PLLQGLLRMV VDNNKKVQEA GCSAFAILEE QAGPSLVPYL 540
541 EPILTNLAFA FQKYQRKNVL ILYDAVQTLA DYVGSALNDK RYIELLITPL LQKWSMIPDD 600
601 DPNLFPLFEC LSSVAVALRD GFAPFAAETY ARTFRILRNT LYLITTAQND PTVDVPDRDF 660
661 LVTTLDLVSG IIQALGSQVS PLLAQADPPL GQIIGICAKD EVPEVRQSAY ALLGDMCMYC 720
721 FDQIRPYCDA LLVDMLPQMQ LPLLHVSASN NAIWSAGEMA LQLGKDMQQW VKPLLERLIC 780
781 ILKSKKSNTT VLENVAITIG RLGVYNPELV APHLELFYQP WFEIIKTVGE NEEKDSAFRG 840
841 FCNILACNPQ ALSYLLPMFV LCVAEYENPS AELRDMFQKI LQGSVELFNG KASWQASPEV 900
901 LAQIQAQYGV
|
| Detection Method: |  |
| Confidence: | 136.0 |
| Match: | 1qbkB |
| Description: | Karyopherin beta2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein transporter activity | 4.58709163830613 | bayes_pls_golite062009 |
| binding | 3.0667965351474 | bayes_pls_golite062009 |
| protein transmembrane transporter activity | 2.74547353635661 | bayes_pls_golite062009 |
| transporter activity | 2.48700774379895 | bayes_pls_golite062009 |
| nucleic acid binding | 2.34284977509828 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 2.26725422172281 | bayes_pls_golite062009 |
| nuclear localization sequence binding | 1.91487015967262 | bayes_pls_golite062009 |
| transcription regulator activity | 1.76231475025891 | bayes_pls_golite062009 |
| protein binding | 1.73688475473996 | bayes_pls_golite062009 |
| DNA binding | 1.62032607987786 | bayes_pls_golite062009 |
| nuclear export signal receptor activity | 1.29390474721722 | bayes_pls_golite062009 |
| transmembrane transporter activity | 1.28481004323799 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 1.09652988954158 | bayes_pls_golite062009 |
| transcription factor activity | 0.923253759652909 | bayes_pls_golite062009 |
| structural molecule activity | 0.908029258648777 | bayes_pls_golite062009 |
| translation initiation factor activity | 0.83079633551839 | bayes_pls_golite062009 |
| translation regulator activity | 0.82193201542158 | bayes_pls_golite062009 |
| translation factor activity, nucleic acid binding | 0.803700928110921 | bayes_pls_golite062009 |
| molecular transducer activity | 0.662662274021266 | bayes_pls_golite062009 |
| signal transducer activity | 0.662662274021266 | bayes_pls_golite062009 |
| signal sequence binding | 0.57106697498903 | bayes_pls_golite062009 |
| mRNA binding | 0.46864854653143 | bayes_pls_golite062009 |
| RNA binding | 0.40024158562931 | bayes_pls_golite062009 |
| clathrin binding | 0.35775052108553 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 0.252495966234234 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.248585912061178 | bayes_pls_golite062009 |
| primary active transmembrane transporter activity | 0.226380819487924 | bayes_pls_golite062009 |
| P-P-bond-hydrolysis-driven transmembrane transporter activity | 0.217517113570989 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | 0.178770060806735 | bayes_pls_golite062009 |
| ATPase activity, coupled to movement of substances | 0.175241020572885 | bayes_pls_golite062009 |
| ATPase activity, coupled to transmembrane movement of substances | 0.174922130116569 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.100181463251306 | bayes_pls_golite062009 |
| pyrophosphatase activity | 0.0635404099346928 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 0.0548082069333885 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 0.052195223119721 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 0.0405268469927988 | bayes_pls_golite062009 |
| transcription activator activity | 0.0232727461674547 | bayes_pls_golite062009 |
