| Protein: | gi|123996925, gi... |
| Organism: | synthetic construct |
| Length: | 660 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|123996925, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..660] | [1..660] |
|
|
0.0 | [1..660] | [1..660] |
|
|
0.0 | [1..660] | [1..660] |
|
|
0.0 | [1..660] | [1..662] |
|
|
0.0 | [1..660] | [1..662] |
|
|
0.0 | [1..660] | [1..662] |
|
|
0.0 | [2..660] | [3..661] |
|
|
0.0 | [17..660] | [1..644] |
|
|
0.0 | [1..660] | [1..660] |
|
Region A: Residues: [1-660] |
1 11 21 31 41 51
| | | | | |
1 MEALMARGAL TGPLRALCLL GCLLSHAAAA PSPIIKFPGD VAPKTDKELA VQYLNTFYGC 60
61 PKESCNLFVL KDTLKKMQKF FGLPQTGDLD QNTIETMRKP RCGNPDVANY NFFPRKPKWD 120
121 KNQITYRIIG YTPDLDPETV DDAFARAFQV WSDVTPLRFS RIHDGEADIM INFGRWEHGD 180
181 GYPFDGKDGL LAHAFAPGTG VGGDSHFDDD ELWTLGEGQV VRVKYGNADG EYCKFPFLFN 240
241 GKEYNSCTDT GRSDGFLWCS TTYNFEKDGK YGFCPHEALF TMGGNAEGQP CKFPFRFQGT 300
301 SYDSCTTEGR TDGYRWCGTT EDYDRDKKYG FCPETAMSTV GGNSEGAPCV FPFTFLGNKY 360
361 ESCTSAGRSD GKMWCATTAN YDDDRKWGFC PDQGYSLFLV AAHEFGHAMG LEHSQDPGAL 420
421 MAPIYTYTKN FRLSQDDIKG IQELYGASPD IDLGTGPTPT LGPVTPEICK QDIVFDGIAQ 480
481 IRGEIFFFKD RFIWRTVTPR DKPMGPLLVA TFWPELPEKI DAVYEAPQEE KAVFFAGNEY 540
541 WIYSASTLER GYPKPLTSLG LPPDVQRVDA AFNWSKNKKT YIFAGDKFWR YNEVKKKMDP 600
601 GFPKLIADAW NAIPDNLDAV VDLQGGGHSY FFKGAYYLKL ENQSLKSVKF GSIKSDWLGC 660
661
|
| Detection Method: |  |
| Confidence: | 1000.0 |
| Match: | 1ck7A |
| Description: | Gelatinase A (MMP-2); Gelatinase A (MMP-2), C-terminal domain; Gelatinase A; Gelatinase A (MMP-2) type II modules |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| peptidase activity | 5.33358263548929 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 4.99457783001146 | bayes_pls_golite062009 |
| endopeptidase activity | 4.16532996235931 | bayes_pls_golite062009 |
| fibronectin binding | 3.98501508968372 | bayes_pls_golite062009 |
| metallopeptidase activity | 3.94798058866011 | bayes_pls_golite062009 |
| metalloendopeptidase activity | 3.43236442601127 | bayes_pls_golite062009 |
| hydrolase activity | 2.55673800115122 | bayes_pls_golite062009 |
| integrin binding | 2.21480172712354 | bayes_pls_golite062009 |
| exopeptidase activity | 2.07461908743946 | bayes_pls_golite062009 |
| receptor binding | 2.07222569254168 | bayes_pls_golite062009 |
| protein complex binding | 1.73407494465529 | bayes_pls_golite062009 |
| protein binding | 1.58118182554863 | bayes_pls_golite062009 |
| binding | 1.55761777216628 | bayes_pls_golite062009 |
| glycosaminoglycan binding | 0.994405248731328 | bayes_pls_golite062009 |
| catalytic activity | 0.891187593353827 | bayes_pls_golite062009 |
| zinc ion binding | 0.49304764842799 | bayes_pls_golite062009 |
| heparin binding | 0.47163706628903 | bayes_pls_golite062009 |
| polysaccharide binding | 0.46452174183235 | bayes_pls_golite062009 |
| serine hydrolase activity | 0.393080846858665 | bayes_pls_golite062009 |
| serine-type peptidase activity | 0.374597710524442 | bayes_pls_golite062009 |
| growth factor activity | 0.259654587796416 | bayes_pls_golite062009 |
| serine-type endopeptidase activity | 0.252655558968584 | bayes_pls_golite062009 |
| aminopeptidase activity | 0.21808506596674 | bayes_pls_golite062009 |
| transition metal ion binding | 0.21514043665594 | bayes_pls_golite062009 |
| signal transducer activity | 0.120905338073793 | bayes_pls_golite062009 |
| molecular transducer activity | 0.120905338073793 | bayes_pls_golite062009 |
| peptidyl-dipeptidase activity | 0.0679084139446893 | bayes_pls_golite062009 |
| interleukin-6 receptor binding | 0.0344783818483405 | bayes_pls_golite062009 |
