| Protein: | IMA1B_ORYSA |
| Organism: | Oryza sativa |
| Length: | 534 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for IMA1B_ORYSA.
| Description | E-value | Query Range |
Subject Range |
|
|
456.0 | [0..1] | [534..1] |
|
Region A: Residues: [1-534] |
1 11 21 31 41 51
| | | | | |
1 MSLRPSERAE VRRSRYKVAV DADEGRRRRE DNMVEIRKSR REESLLKKRR DGLPAAAAAA 60
61 AAASPLLAHS SALQQKLEGL PAMVQAVQSD DSAVQLEATT QFRKLLSIER SPPIEEVINT 120
121 GVVPRFIAFL QREDYPQLQF EAAWALTNIA SGTSDNTKVV VESGAVPIFV KLLSSPSEDV 180
181 REQAVWALGN VAGDSPKCRD LVLASGGLYP LLQQLNEHAK LSMLRNATWT LSNFCRGKPQ 240
241 PNFEQVKPAL SALQRLIHSQ DEEVLTDACW ALSYLSDGTN DKIQAVIESG VFPRLVELLM 300
301 HPSASVLIPA LRTVGNIVTG DDMQTQCVID HQALPCLLNL LTNNHKKSIK KEACWTISNI 360
361 TAGNREQIQA VINANIIAPL VHLLQTAEFD IKKEAAWAIS NATSGGTHDQ IKYLVAQGCI 420
421 KPLCDLLVCP DPRIVTVCLE GLENILKVGE AEKNLGAGDV NSYAQMIDDA EGLEKIENLQ 480
481 SHDNTEIYEK AVKMLESYWL EEEDDAMPSG DNAQNGFNFG NQQPNVPSGG FNFG
|
| Detection Method: |  |
| Confidence: | 104.0 |
| Match: | 1wa5B |
| Description: | Crystal structure of the exportin Cse1p complexed with its cargo ( Kap60p) and RanGTP |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein transporter activity | 4.58709163830613 | bayes_pls_golite062009 |
| nuclear export signal receptor activity | 3.48172991171337 | bayes_pls_golite062009 |
| binding | 3.0667965351474 | bayes_pls_golite062009 |
| actin binding | 2.8014924948341 | bayes_pls_golite062009 |
| nucleic acid binding | 2.74745843355294 | bayes_pls_golite062009 |
| protein transmembrane transporter activity | 2.74547353635661 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 2.61566088685247 | bayes_pls_golite062009 |
| transporter activity | 2.48700774379895 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 2.26725422172281 | bayes_pls_golite062009 |
| transcription regulator activity | 2.16673352512615 | bayes_pls_golite062009 |
| DNA binding | 1.95242774903625 | bayes_pls_golite062009 |
| nuclear localization sequence binding | 1.91487015967262 | bayes_pls_golite062009 |
| protein binding | 1.73688475473996 | bayes_pls_golite062009 |
| molecular transducer activity | 1.32874350341969 | bayes_pls_golite062009 |
| signal transducer activity | 1.32874350341969 | bayes_pls_golite062009 |
| transmembrane transporter activity | 1.28481004323799 | bayes_pls_golite062009 |
| transcription factor activity | 1.20660383756339 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 1.09652988954158 | bayes_pls_golite062009 |
| signal sequence binding | 0.57106697498903 | bayes_pls_golite062009 |
| RNA binding | 0.40024158562931 | bayes_pls_golite062009 |
| structural molecule activity | 0.279926218252647 | bayes_pls_golite062009 |
| importin-alpha export receptor activity | 0.259676026705859 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 0.252495966234234 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.248585912061178 | bayes_pls_golite062009 |
| primary active transmembrane transporter activity | 0.226380819487924 | bayes_pls_golite062009 |
| P-P-bond-hydrolysis-driven transmembrane transporter activity | 0.217517113570989 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | 0.178770060806735 | bayes_pls_golite062009 |
| ATPase activity, coupled to movement of substances | 0.175241020572885 | bayes_pls_golite062009 |
| ATPase activity, coupled to transmembrane movement of substances | 0.174922130116569 | bayes_pls_golite062009 |
| transcription activator activity | 0.160275383613705 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.100181463251306 | bayes_pls_golite062009 |
| pyrophosphatase activity | 0.0635404099346928 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 0.0548082069333885 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 0.052195223119721 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 0.0405268469927988 | bayes_pls_golite062009 |
| transcription factor binding | 0.0221966060394205 | bayes_pls_golite062009 |
