| Protein: | FBpp0298328, FBp... |
| Organism: | Drosophila melanogaster |
| Length: | 730 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0298328, FBp....
| Description | E-value | Query Range |
Subject Range |
|
|
231.0 | [0..93] | [730..3] |
|
Region A: Residues: [1-210] |
1 11 21 31 41 51
| | | | | |
1 MTESGIDLGF DMEFDLNINL LNDNDNMDFL PNVTENMEFY ELKSSSRCIR HNEIPTFKTA 60
61 TPTSRTQLKL QLQREQQQQM MIQQQTLDTA MDPKMHLLFG SGQGLMESEF IDSGSTSACG 120
121 SGSSSLEQMS QLVQMDNLID SSSGAKLKVP LQSIGVDVPP QVLQVSTVLE NPTRYHVIQK 180
181 QKNQVRQYLS ESFKPSMWGS HTSEIKLANN
|
| Detection Method: |  |
| Confidence: | 4.045757 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [211-357] |
1 11 21 31 41 51
| | | | | |
1 SASTGNLQNS SLQKGICDPL ERTNRFGCDS AVSAKRIMPS DDAMPISPFG GSFVRCDDIN 60
61 PIEPTVLRPN SHGAGEPENA HRTAQLGLSK ANSSLSSTRS SSGIVNSIRI SSTSSSLQST 120
121 SAPISPSVSS VATSVSELPS FDSDPDD
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [358-540] |
1 11 21 31 41 51
| | | | | |
1 IFDDILQNDS FNFDKNFNSE LSIKQEPQNL TDAEMNALAK DRQKKDNHNM IERRRRFNIN 60
61 DRIKELGTLL PKGSDAFYEV VRDIRPNKGT ILKSSVDYIK CLKHEVTRLR QNELRQRQVE 120
121 LQNRKLMSRI KELEMQAKSH GILLSENHLT SLSAPTQPYL KSFSLSPTAS RSRRSLFDQP 180
181 VEK
|
| Detection Method: | |
| Confidence: | 9.39794 |
| Match: | 1r05A |
| Description: | Solution Structure of Max B-HLH-LZ |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 5.38658950816179 | bayes_pls_golite062009 |
| DNA binding | 5.18654839258297 | bayes_pls_golite062009 |
| nucleic acid binding | 5.05768805749761 | bayes_pls_golite062009 |
| transcription factor activity | 4.78039531631248 | bayes_pls_golite062009 |
| transcription activator activity | 3.87875547821718 | bayes_pls_golite062009 |
| binding | 3.81829206350975 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 3.42035985454056 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 3.39500382187264 | bayes_pls_golite062009 |
| protein binding | 2.64975291677725 | bayes_pls_golite062009 |
| transcription factor binding | 2.61163564741984 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity, enhancer binding | 2.42306484786159 | bayes_pls_golite062009 |
| transcription cofactor activity | 1.52770895937238 | bayes_pls_golite062009 |
| transcription repressor activity | 0.955588849035129 | bayes_pls_golite062009 |
| promoter binding | 0.8576109846276 | bayes_pls_golite062009 |
| transcription corepressor activity | 0.801830750183111 | bayes_pls_golite062009 |
| protein heterodimerization activity | 0.53175615551166 | bayes_pls_golite062009 |
| transcription coactivator activity | 0.3513586903977 | bayes_pls_golite062009 |
| protein dimerization activity | 0.20674648626116 | bayes_pls_golite062009 |
|
Region A: Residues: [541-730] |
1 11 21 31 41 51
| | | | | |
1 KIQVIDGADG NMGMNQVDEF MEDCKYAVQG GDPMLSSHSH MQSAPQSPSS KTLNSGSFEP 60
61 KNFSEADESL FRGKSSLASD DCCGINCSTS CYIQHQLTSR EGHPNHSHHT GIREIHSLSD 120
121 SAQNSEFSRL EHCDDPLLSS SHRSLGTVDE DQHNSVDMSA VMVHDSLSSL VDDNNSETMV 180
181 LASDTLDIEL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
