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Protein Overview: gi|62861862, gi|...

General Information:
Name(s) found: gi|62861862 [NCBI NR]
gi|51950990 [NCBI NR]
Description(s) found:
Found 3 descriptions.
SHOW ALL
  • gi|62861862|ref|NP_001015077.1| CG17469-PA.3 [Drosophila melanogaster] [NCBI NR]
  • gi|51950990|gb|EAL24533.1| CG17469-PA.3 [Drosophila melanogaster] [NCBI NR]
    • Organism: Drosophila melanogaster
    Length: 640 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDPKMHLLFG SGQGLMESEF IDSGSTSACG SGSSSLEQMS QLVQMDNLID SSSGAKLKVP  60
   61 LQSIGVDVPP QVLQVSTVLE NPTRYHVIQK QKNQVRQYLS ESFKPSMWGS HTSEIKLANN 120
  121 SASTGNLQNS SLQKGICDPL ERTNRFGCDS AVSAKRIMPS DDAMPISPFG GSFVRCDDIN 180
  181 PIEPTVLRPN SHGAGEPENA HRTAQLGLSK ANSSLSSTRS SSGIVNSIRI SSTSSSLQST 240
  241 SAPISPSVSS VATSVSELPS FDSDPDDIFD DILQNDSFNF DKNFNSELSI KQEPQNLTDA 300
  301 EMNALAKDRQ KKDNHNMIER RRRFNINDRI KELGTLLPKG SDAFYEVVRD IRPNKGTILK 360
  361 SSVDYIKCLK HEVTRLRQNE LRQRQVELQN RKLMSRIKEL EMQAKSHGIL LSENHLTSLS 420
  421 APTQPYLKSF SLSPTASRSR RSLFDQPVEK KIQVIDGADG NMGMNQVDEF MEDCKYAVQG 480
  481 GDPMLSSHSH MQSAPQSPSS KTLNSGSFEP KNFSEADESL FRGKSSLASD DCCGINCSTS 540
  541 CYIQHQLTSR EGHPNHSHHT GIREIHSLSD SAQNSEFSRL EHCDDPLLSS SHRSLGTVDE 600
  601 DQHNSVDMSA VMVHDSLSSL VDDNNSETMV LASDTLDIEL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..108] MSA 6.266996 View MSA. No confident structure predictions are available.
    2 View Details [109..297] deduced N/A No confident structure predictions are available.
    3 View Details [298..409] PSI-BLAST 14.0 Myc prot-oncogene protein
    4 View Details [410..568] MSA 1.17998 View MSA. No confident structure predictions are available.
    5 View Details [569..640] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • transcription regulator activity
    		•  5.38658950816179 bayes_pls_golite062009
  • DNA binding
    		•  5.18654839258297 bayes_pls_golite062009
  • nucleic acid binding
    		•  5.05768805749761 bayes_pls_golite062009
  • transcription factor activity
    		•  4.78039531631248 bayes_pls_golite062009
  • transcription activator activity
    		•  3.87875547821718 bayes_pls_golite062009
  • binding
    		•  3.81829206350975 bayes_pls_golite062009
  • sequence-specific DNA binding
    		•  3.42035985454056 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
    		•  3.39500382187264 bayes_pls_golite062009
  • protein binding
    		•  2.64975291677725 bayes_pls_golite062009
  • transcription factor binding
    		•  2.61163564741984 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity, enhancer binding
    		•  2.42306484786159 bayes_pls_golite062009
  • transcription cofactor activity
    		•  1.52770895937238 bayes_pls_golite062009
  • transcription repressor activity
    		•  0.955588849035129 bayes_pls_golite062009
  • promoter binding
    		•  0.8576109846276 bayes_pls_golite062009
  • transcription corepressor activity
    		•  0.801830750183111 bayes_pls_golite062009
  • protein heterodimerization activity
    		•  0.53175615551166 bayes_pls_golite062009
  • transcription coactivator activity
    		•  0.3513586903977 bayes_pls_golite062009
  • protein dimerization activity
    		•  0.20674648626116 bayes_pls_golite062009
    4 No functions predicted.
    5 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle