| Protein: | gi|42408030, gi|... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 478 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42408030, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
378.0 | [0..1] | [478..1] |
|
Region A: Residues: [1-380] |
1 11 21 31 41 51
| | | | | |
1 MHLSENEGIE GVRFAVTGGQ GFVGSALCLE LLRRGAREVR SLDLRASSPW SDQLLGAGVR 60
61 FFQGDVRKKE DVGKALRGVD CVFHLASYGM SGKEMVQAGR ADEVNINGTC NVLDACHEHG 120
121 VRRLVYVSTY NVVFGGEPIV NGNEALPYFP VEDHVDAYAR SKSIAEQLVL KSNGRQTKSD 180
181 KSSRLYTCSI RPAAIYGPGE ERHLPRILSL AKLGLAFFKI GDPNVKSDWV YVDNLVLALI 240
241 LASMGLLDDI PDRKGIPVAA GQAYFICDGS PVNTFEFLSP LFQSLDYTVP RVRMDTSVAL 300
301 AISRFFVFMY TLLYPWLDSK WIPQPLLLPA EVYKVGVTHY FSYLKAREEI GYVPMVSPRE 360
361 GLAATISYWQ ERKRKELDGP
|
| Detection Method: |  |
| Confidence: | 78.045757 |
| Match: | 1bxkA |
| Description: | dTDP-glucose 4,6-dehydratase (RmlB) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| steroid dehydrogenase activity | 3.70115036051018 | bayes_pls_golite062009 |
| steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 3.56748749904419 | bayes_pls_golite062009 |
| oxidoreductase activity | 3.09625241707629 | bayes_pls_golite062009 |
| retinol dehydrogenase activity | 3.08644105481774 | bayes_pls_golite062009 |
| UDP-glucose 4-epimerase activity | 2.13934644118967 | bayes_pls_golite062009 |
| 3-alpha(17-beta)-hydroxysteroid dehydrogenase (NAD+) activity | 1.80383455383329 | bayes_pls_golite062009 |
| catalytic activity | 1.79741889688267 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on CH-OH group of donors | 1.65338499044318 | bayes_pls_golite062009 |
| receptor activity | 1.59521607141455 | bayes_pls_golite062009 |
| transmembrane receptor activity | 1.57495858691649 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 1.47309297191111 | bayes_pls_golite062009 |
| ethanol binding | 1.43137718523288 | bayes_pls_golite062009 |
| retinol binding | 1.36627553306209 | bayes_pls_golite062009 |
| molecular transducer activity | 1.28375985874563 | bayes_pls_golite062009 |
| signal transducer activity | 1.28375985874563 | bayes_pls_golite062009 |
| C-3 sterol dehydrogenase (C-4 sterol decarboxylase) activity | 1.03845584151228 | bayes_pls_golite062009 |
| DNA binding | 0.925435782369235 | bayes_pls_golite062009 |
| transcription regulator activity | 0.830735196151903 | bayes_pls_golite062009 |
| nucleic acid binding | 0.805690663404413 | bayes_pls_golite062009 |
| benzaldehyde dehydrogenase activity | 0.74738022559788 | bayes_pls_golite062009 |
| fatty acid synthase activity | 0.714637370305282 | bayes_pls_golite062009 |
| retinoid binding | 0.67821643688355 | bayes_pls_golite062009 |
| alcohol dehydrogenase (NAD) activity | 0.65743456407889 | bayes_pls_golite062009 |
| G-protein coupled receptor activity | 0.648902636946461 | bayes_pls_golite062009 |
| 11-beta-hydroxysteroid dehydrogenase activity | 0.617411823427239 | bayes_pls_golite062009 |
| isoprenoid binding | 0.56322670082984 | bayes_pls_golite062009 |
| binding | 0.553666136934364 | bayes_pls_golite062009 |
| testosterone 17-beta-dehydrogenase activity | 0.532187027260366 | bayes_pls_golite062009 |
| NAD or NADH binding | 0.44922383360529 | bayes_pls_golite062009 |
| transcription factor activity | 0.288669328257774 | bayes_pls_golite062009 |
| all-trans retinal binding | 0.218888750914841 | bayes_pls_golite062009 |
| 3-oxoacyl-[acyl-carrier-protein] reductase activity | 0.192594057004213 | bayes_pls_golite062009 |
| NADPH:quinone reductase activity | 0.0435917990586205 | bayes_pls_golite062009 |
|
Region A: Residues: [381-478] |
1 11 21 31 41 51
| | | | | |
1 TIFPWLFVTI GMLALFSAAY LPPVGPLKWV LDLHLFVFRS KLVIRLVFVI ATALHVGEAV 60
61 YAWFLAKKYD PRNATGWFWQ TFMLGFFSLR YLLKRMRE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
