| Protein: | gi|18424049, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 227 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|18424049, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
135.0 | [0..1] | [223..30] |
|
Region A: Residues: [1-227] |
1 11 21 31 41 51
| | | | | |
1 MVGANLKAET MALMDKRTAM ETEMNSIVER LCNPGGPGLS GNLIDSEGFP REDIDIPMVR 60
61 TERRRLAELR SEHGEITEKI NVNIQILHSV RPTSRASSTK DSGPEETSLS GAAVNSLSAS 120
121 MQTSGFSVTS GPMDVDVVTS IPFAMVDEIN ESSPAAEGGL QLGDQVLKFG NVEGGDNLLQ 180
181 RLAAEAQSNQ GQAVSVQVMR QGAKVVLSVT PRIWQGRGLL GCHFRLV
|
| Detection Method: |  |
| Confidence: | 29.522879 |
| Match: | 1ky9A |
| Description: | Protease Do (DegP, HtrA), C-terminal domains; Protease Do (DegP, HtrA), catalytic domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| peptidase activity | 8.39437658618072 | bayes_pls_golite062009 |
| endopeptidase activity | 8.14207041625331 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 8.09394010519266 | bayes_pls_golite062009 |
| hydrolase activity | 5.48883166914036 | bayes_pls_golite062009 |
| serine hydrolase activity | 3.10188179747851 | bayes_pls_golite062009 |
| serine-type peptidase activity | 3.09356744910628 | bayes_pls_golite062009 |
| serine-type endopeptidase activity | 2.91265669601085 | bayes_pls_golite062009 |
| transcription regulator activity | 2.16834620509051 | bayes_pls_golite062009 |
| nucleic acid binding | 2.1333716364785 | bayes_pls_golite062009 |
| DNA binding | 1.94746941980264 | bayes_pls_golite062009 |
| catalytic activity | 1.40927913545237 | bayes_pls_golite062009 |
| transcription activator activity | 1.37255187012662 | bayes_pls_golite062009 |
| binding | 1.30738106455622 | bayes_pls_golite062009 |
| protein binding | 1.30414885212044 | bayes_pls_golite062009 |
| transporter activity | 0.666562078558936 | bayes_pls_golite062009 |
| transmembrane transporter activity | 0.510205657363692 | bayes_pls_golite062009 |
| enzyme binding | 0.46071739042312 | bayes_pls_golite062009 |
| ubiquitin-protein ligase activity | 0.342817187733892 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 0.299572882681276 | bayes_pls_golite062009 |
| structural molecule activity | 0.153277808949873 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.141613198202921 | bayes_pls_golite062009 |
| PDZ domain binding | 0.0604467745298803 | bayes_pls_golite062009 |
| transcription factor binding | 0.0283953080227368 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 0.0187659836234897 | bayes_pls_golite062009 |
