| Protein: | CLSY2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 1261 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CLSY2_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
790.0 | [0..1] | [1261..1] |
|
Region A: Residues: [1-207] |
1 11 21 31 41 51
| | | | | |
1 MKKRGFYNLK HPFDPCPFEF FCSGTWKPVE YMRIEDGMMT IRLLENGYVL EDIRPFQRLR 60
61 LRSRKAALSD CICFLRPDID VCVLYRIHED DLEPVWVDAR IVSIERKPHE SECSCKINVR 120
121 IYIDQGCIGS EKQRINRDSV VIGLNQISIL QKFYKEQSTD QFYRWRFSED CTSLMKTRLS 180
181 LGKFLPDLSW LTVTSTLKSI VFQIRTV
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [208-394] |
1 11 21 31 41 51
| | | | | |
1 QTKMVYQIVT DEEGSSSTLS SMNITLEDGV SLSKVVKFNP ADILDDSQDL EIKQETDYYQ 60
61 EEDEVVELRR SKRRNVRPDI YTGCDYEPDT IDGWVRMMPY QFGKCAVNVE SDEDEDDNNE 120
121 DGDTNDDLYI PLSRLFIKKK KTNSREAKPK SRKGEIVVID KRRVHGFGRK ERKSELSVIP 180
181 FTPVFEP
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [395-576] |
1 11 21 31 41 51
| | | | | |
1 IPLEQFGLNA NSFGGGGSFS RSQYFDETEK YRSKGMKYGK KMTEMEEMME ADLCWKGPNQ 60
61 VKSFQKRTSR SSRSVAPKTE DSDEPRVYKK VTLSAGAYNK LIDTYMNNIE STIAAKDEPT 120
121 SVVDQWEELK KTNFAFKLHG DMEKNLSEDG EGETSENEML WREMELCLAS SYILDDNEVR 180
181 VD
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [577-1261] |
1 11 21 31 41 51
| | | | | |
1 NEAFEKARSG CEHDYRLEEE IGMCCRLCGH VGSEIKDVSA PFAEHKKWTI ETKHIEEDDI 60
61 KTKLSHKEAQ TKDFSMISDS SEMLAAEESD NVWALIPKLK RKLHVHQRRA FEFLWRNVAG 120
121 SVEPSLMDPT SGNIGGCVIS HSPGAGKTFL IIAFLTSYLK LFPGKRPLVL APKTTLYTWY 180
181 KEFIKWEIPV PVHLIHGRRT YCTFKQNKTV QFNGVPKPSR DVMHVLDCLE KIQKWHAHPS 240
241 VLVMGYTSFT TLMREDSKFA HRKYMAKVLR ESPGLLVLDE GHNPRSTKSR LRKALMKVGT 300
301 DLRILLSGTL FQNNFCEYFN TLCLARPKFI HEVLMELDQK FKTNHGVNKA PHLLENRARK 360
361 LFLDIIAKKI DASVGDERLQ GLNMLKNMTN GFIDNYEGSG SGSGDALPGL QIYTLVMNST 420
421 DIQHKILTKL QDVIKTYFGY PLEVELQITL AAIHPWLVTS SNCCTKFFNP QELSEIGKLK 480
481 HDAKKGSKVM FVLNLIFRVV KREKILIFCH NIAPIRMFTE LFENIFRWQR GREILTLTGD 540
541 LELFERGRVI DKFEEPGNPS RVLLASITAC AEGISLTAAS RVIMLDSEWN PSKTKQAIAR 600
601 AFRPGQQKVV YVYQLLSRGT LEEDKYRRTT WKEWVSCMIF SEEFVADPSL WQAEKIEDDI 660
661 LREIVGEDKV KSFHMIMKNE KASTG
|
| Detection Method: | |
| Confidence: | 75.0 |
| Match: | 1z3iX |
| Description: | Structure of the SWI2/SNF2 chromatin remodeling domain of eukaryotic Rad54 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| nucleoside-triphosphatase activity | 1.69240737024755 | bayes_pls_golite062009 |
| pyrophosphatase activity | 1.65296291878002 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 1.64318297340116 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 1.64169398852165 | bayes_pls_golite062009 |
| catalytic activity | 1.37148167194523 | bayes_pls_golite062009 |
| binding | 1.30574971150356 | bayes_pls_golite062009 |
| ATPase activity | 1.20060977637766 | bayes_pls_golite062009 |
| transporter activity | 1.14815595550467 | bayes_pls_golite062009 |
| ATPase activity, coupled | 1.08141765801535 | bayes_pls_golite062009 |
| transmembrane transporter activity | 1.01232806016411 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 0.92246823619313 | bayes_pls_golite062009 |
| P-P-bond-hydrolysis-driven transmembrane transporter activity | 0.89546790004613 | bayes_pls_golite062009 |
| primary active transmembrane transporter activity | 0.89065853471483 | bayes_pls_golite062009 |
| hydrolase activity | 0.875592967682638 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | 0.8668136831732 | bayes_pls_golite062009 |
| ATPase activity, coupled to movement of substances | 0.86536264587818 | bayes_pls_golite062009 |
| ATPase activity, coupled to transmembrane movement of substances | 0.86511385357843 | bayes_pls_golite062009 |
| nucleic acid binding | 0.495953203188599 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 0.3056113353665 | bayes_pls_golite062009 |
| ribonucleotide binding | 0.30512981340046 | bayes_pls_golite062009 |
| purine nucleotide binding | 0.30259037403175 | bayes_pls_golite062009 |
| nucleotide binding | 0.28998663538132 | bayes_pls_golite062009 |
| DNA binding | 0.128213991729785 | bayes_pls_golite062009 |
| transcription regulator activity | 0.125640198783258 | bayes_pls_golite062009 |
| helicase activity | 0.00674361801283974 | bayes_pls_golite062009 |
