| Protein: | gi|30695789 |
| Organism: | Arabidopsis thaliana |
| Length: | 387 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30695789.
| Description | E-value | Query Range |
Subject Range |
|
|
285.0 | [0..2] | [342..11] |
|
Region A: Residues: [1-387] |
1 11 21 31 41 51
| | | | | |
1 MTKKKNPNVF LDVSIGGDPV QRIVIELFAD VVPKTAENFR ALCTGEAGVG KSTGKPLHFK 60
61 GSSFHRVIKG FMAQGGDFSN GNGTGGESIY GGKFSDENFR LDHDGAGVLS MANCGPNTNG 120
121 SQFFILFKRQ PHLDGKHVVF GKVVEGMAVI KKMELVGTSD GKPTSPVKII DCGETSQIRA 180
181 HDAAEREKGK SKKSNKNFSP GDVSDREAKE TRKKESNEKR IKRKRRYSSS DSYSSSSDSD 240
241 SDSESEAYSS SSYESSSSSD GKHRKRKSTT RHKGRRGERK SKGRSGKKKA RPDRKPSTNS 300
301 SSDTESSSSS DDGYRRRLRD GSRSQSPRHR SRSQSPRKRQ PISQDLKSRL GPQRSPIRGG 360
361 RTSPAESLSP SHSPSPPGKR GLVSYAD
|
| Detection Method: |  |
| Confidence: | 75.0 |
| Match: | 1ihgA |
| Description: | Cyclophilin 40; Cyclophilin 40 isomerase domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein deacetylase activity | 4.3775483906311 | bayes_pls_golite062009 |
| histone deacetylase activity | 4.29026678196473 | bayes_pls_golite062009 |
| peptidyl-prolyl cis-trans isomerase activity | 3.73853378771688 | bayes_pls_golite062009 |
| cis-trans isomerase activity | 3.66963215732405 | bayes_pls_golite062009 |
| deacetylase activity | 3.49940864924766 | bayes_pls_golite062009 |
| hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 3.01511519120932 | bayes_pls_golite062009 |
| RNA binding | 2.94609837984526 | bayes_pls_golite062009 |
| signal sequence binding | 2.68460419248567 | bayes_pls_golite062009 |
| isomerase activity | 1.96529188741504 | bayes_pls_golite062009 |
| binding | 1.46018233647024 | bayes_pls_golite062009 |
| mRNA binding | 1.45537055700871 | bayes_pls_golite062009 |
| unfolded protein binding | 1.38124355054041 | bayes_pls_golite062009 |
| transcription regulator activity | 1.26149030245805 | bayes_pls_golite062009 |
| peroxisome targeting sequence binding | 1.01220052237687 | bayes_pls_golite062009 |
| DNA binding | 0.9531600253493 | bayes_pls_golite062009 |
| nucleic acid binding | 0.939772862764466 | bayes_pls_golite062009 |
| catalytic activity | 0.748655649755714 | bayes_pls_golite062009 |
| hydrolase activity | 0.493806105600863 | bayes_pls_golite062009 |
| hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | 0.408539130322443 | bayes_pls_golite062009 |
| transcription factor activity | 0.374364600772076 | bayes_pls_golite062009 |
| drug binding | 0.36339132904137 | bayes_pls_golite062009 |
| ubiquitin-protein ligase activity | 0.322244688184474 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 0.286133802341887 | bayes_pls_golite062009 |
| histone binding | 0.268719695649015 | bayes_pls_golite062009 |
| protein binding | 0.130251391659493 | bayes_pls_golite062009 |
| N-acetyltransferase activity | 0.105969834846946 | bayes_pls_golite062009 |
