| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.037] [SVM Score: 0.700584146056] |
| Complex Size: | 2 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| eukaryotic translation elongation factor 1 complex | 1.5888E-3 | 2 | 5 | 1 | 6292 |
| ribosome | 2.1173E-3 | 2 | 290 | 2 | 6292 |
| ribonucleoprotein complex | 6.6615E-3 | 2 | 514 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| translation elongation factor activity | 2.779E-6 | 2 | 11 | 2 | 6292 |
| GTP binding | 6.0632E-6 | 2 | 16 | 2 | 6292 |
| guanyl ribonucleotide binding | 6.0632E-6 | 2 | 16 | 2 | 6292 |
| guanyl nucleotide binding | 7.7306E-6 | 2 | 18 | 2 | 6292 |
| ribonucleotide binding | 4.1432E-5 | 2 | 41 | 2 | 6292 |
| purine ribonucleotide binding | 4.1432E-5 | 2 | 41 | 2 | 6292 |
| translation factor activity, nucleic acid binding | 4.7798E-5 | 2 | 44 | 2 | 6292 |
| purine nucleotide binding | 6.6999E-5 | 2 | 52 | 2 | 6292 |
| nucleotide binding | 8.6451E-5 | 2 | 59 | 2 | 6292 |
| GTPase activity | 9.2464E-5 | 2 | 61 | 2 | 6292 |
| GDP binding | 3.1786E-4 | 2 | 1 | 1 | 6292 |
| nucleoside-triphosphatase activity | 2.7262E-3 | 2 | 329 | 2 | 6292 |
| hydrolase activity, acting on acid anhydrides | 3.1391E-3 | 2 | 353 | 2 | 6292 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 3.1391E-3 | 2 | 353 | 2 | 6292 |
| pyrophosphatase activity | 3.1391E-3 | 2 | 353 | 2 | 6292 |
| rRNA binding | 5.0798E-3 | 2 | 16 | 1 | 6292 |
| actin binding | 6.6645E-3 | 2 | 21 | 1 | 6292 |
| purine nucleoside binding | 9.8303E-3 | 2 | 31 | 1 | 6292 |