| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.02] [SVM Score: 0.715797168563] |
| Complex Size: | 2 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| holo TFIIH complex | 3.1764E-3 | 2 | 10 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| regulation of transcription, mating-type specific | 1.5888E-3 | 2 | 5 | 1 | 6292 |
| mating type determination | 6.3477E-3 | 2 | 20 | 1 | 6292 |
| sex determination | 6.3477E-3 | 2 | 20 | 1 | 6292 |
| transcription, DNA-dependent | 6.3792E-3 | 2 | 503 | 2 | 6292 |
| RNA biosynthetic process | 6.5067E-3 | 2 | 508 | 2 | 6292 |
| cell fate commitment | 7.2981E-3 | 2 | 23 | 1 | 6292 |
| transcription | 7.6839E-3 | 2 | 552 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| transcription regulator activity | 2.8947E-3 | 2 | 339 | 2 | 6292 |
| specific transcriptional repressor activity | 4.7627E-3 | 2 | 15 | 1 | 6292 |