| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.02] [SVM Score: 0.884069826869] |
| Complex Size: | 2 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| nucleotide-excision repair factor 1 complex | 1.5158E-7 | 2 | 3 | 2 | 6292 |
| nucleotide-excision repair complex | 1.0611E-5 | 2 | 21 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| DNA strand annealing activity | 1.2712E-3 | 2 | 4 | 1 | 6292 |
| DNA binding | 1.6492E-3 | 2 | 256 | 2 | 6292 |
| single-stranded DNA specific endodeoxyribonuclease activity | 2.224E-3 | 2 | 7 | 1 | 6292 |
| zinc ion binding | 2.5415E-3 | 2 | 8 | 1 | 6292 |
| damaged DNA binding | 3.4937E-3 | 2 | 11 | 1 | 6292 |
| single-stranded DNA binding | 5.0798E-3 | 2 | 16 | 1 | 6292 |
| endodeoxyribonuclease activity | 6.9813E-3 | 2 | 22 | 1 | 6292 |
| double-stranded DNA binding | 7.2981E-3 | 2 | 23 | 1 | 6292 |
| transition metal ion binding | 7.6148E-3 | 2 | 24 | 1 | 6292 |
| deoxyribonuclease activity | 9.1975E-3 | 2 | 29 | 1 | 6292 |