| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.02] [SVM Score: 1.16779664947] |
| Complex Size: | 2 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| response to cycloheximide | 3.1786E-4 | 2 | 1 | 1 | 6292 |
| response to cycloalkane | 3.1786E-4 | 2 | 1 | 1 | 6292 |
| response to organic cyclic substance | 3.1786E-4 | 2 | 1 | 1 | 6292 |
| negative regulation of mRNA processing | 3.1786E-4 | 2 | 1 | 1 | 6292 |
| negative regulation of nuclear mRNA splicing, via spliceosome | 3.1786E-4 | 2 | 1 | 1 | 6292 |
| negative regulation of RNA splicing | 3.1786E-4 | 2 | 1 | 1 | 6292 |
| regulation of mRNA processing | 6.3568E-4 | 2 | 2 | 1 | 6292 |
| regulation of RNA splicing | 6.3568E-4 | 2 | 2 | 1 | 6292 |
| regulation of nuclear mRNA splicing, via spliceosome | 6.3568E-4 | 2 | 2 | 1 | 6292 |
| response to antibiotic | 9.5344E-4 | 2 | 3 | 1 | 6292 |
| negative regulation of translation | 2.224E-3 | 2 | 7 | 1 | 6292 |
| translation | 3.5621E-3 | 2 | 376 | 2 | 6292 |
| negative regulation of cellular protein metabolic process | 4.7627E-3 | 2 | 15 | 1 | 6292 |
| negative regulation of protein metabolic process | 5.0798E-3 | 2 | 16 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| structural constituent of ribosome | 1.1301E-3 | 2 | 212 | 2 | 6292 |
| structural molecule activity | 2.8947E-3 | 2 | 339 | 2 | 6292 |