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View Protein Complex Details

Complex Overview

From Publication: Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054
Notes: Classfier did not use Gene Ontology annotations. [FDR: 0.021] [SVM Score: 0.44821114993]
Complex Size: 2 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

NatB complex 9.5344E-4 2 3 1 6292
protein acetyltransferase complex 2.859E-3 2 9 1 6292
N-terminal protein acetyltransferase complex 2.859E-3 2 9 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

negative regulation of mRNA processing 3.1786E-4 2 1 1 6292
negative regulation of nuclear mRNA splicing, via spliceosome 3.1786E-4 2 1 1 6292
negative regulation of RNA splicing 3.1786E-4 2 1 1 6292
regulation of mRNA processing 6.3568E-4 2 2 1 6292
regulation of RNA splicing 6.3568E-4 2 2 1 6292
regulation of nuclear mRNA splicing, via spliceosome 6.3568E-4 2 2 1 6292
N-terminal peptidyl-methionine acetylation 1.2712E-3 2 4 1 6292
peptidyl-methionine modification 1.2712E-3 2 4 1 6292
negative regulation of translation 2.224E-3 2 7 1 6292
N-terminal protein amino acid acetylation 3.1764E-3 2 10 1 6292
peptide or protein amino-terminal blocking 4.7627E-3 2 15 1 6292
negative regulation of cellular protein metabolic process 4.7627E-3 2 15 1 6292
N-terminal protein amino acid modification 4.7627E-3 2 15 1 6292
negative regulation of protein metabolic process 5.0798E-3 2 16 1 6292
peptidyl-amino acid modification 8.5646E-3 2 27 1 6292
mitochondrion distribution 9.1975E-3 2 29 1 6292
mitochondrion inheritance 9.1975E-3 2 29 1 6292
mitochondrion localization 9.5139E-3 2 30 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

peptide alpha-N-acetyltransferase activity 3.1764E-3 2 10 1 6292
peptide N-acetyltransferase activity 3.1764E-3 2 10 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle