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View Protein Complex Details

Complex Overview

From Publication: Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054
Notes: Classfier did not use Gene Ontology annotations. [FDR: 0.021] [SVM Score: 0.811902871194]
Complex Size: 2 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

regulation of conjugation with cellular fusion by signal transduction 1.7735E-5 2 27 2 6292
pheromone-dependent signal transduction involved in conjugation with cellular fusion 1.7735E-5 2 27 2 6292
G-protein coupled receptor protein signaling pathway 2.3495E-5 2 31 2 6292
regulation of multi-organism process 2.5061E-5 2 32 2 6292
regulation of conjugation 2.5061E-5 2 32 2 6292
regulation of conjugation with cellular fusion 2.5061E-5 2 32 2 6292
cell surface receptor linked signaling pathway 2.5061E-5 2 32 2 6292
invasive growth in response to glucose limitation 5.4619E-5 2 47 2 6292
response to pheromone involved in conjugation with cellular fusion 1.44E-4 2 76 2 6292
filamentous growth of a population of unicellular organisms 2.0236E-4 2 90 2 6292
growth of unicellular organism as a thread of attached cells 2.0236E-4 2 90 2 6292
response to pheromone 2.3525E-4 2 97 2 6292
filamentous growth 2.8118E-4 2 106 2 6292
cellular response to chemical stimulus 2.8654E-4 2 107 2 6292
conjugation with cellular fusion 3.9158E-4 2 125 2 6292
conjugation 3.979E-4 2 126 2 6292
response to organic substance 4.7071E-4 2 137 2 6292
multi-organism process 5.13E-4 2 143 2 6292
growth 5.275E-4 2 145 2 6292
signaling pathway 8.5067E-4 2 184 2 6292
osmosensory signaling pathway via Sho1 osmosensor 9.5344E-4 2 3 1 6292
reproductive cellular process 1.1194E-3 2 211 2 6292
reproductive process 1.1301E-3 2 212 2 6292
signal transduction 1.1516E-3 2 214 2 6292
signal transmission 1.1841E-3 2 217 2 6292
signaling process 1.1841E-3 2 217 2 6292
sexual reproduction 1.3656E-3 2 233 2 6292
activation of MAPKK activity 1.5888E-3 2 5 1 6292
activation of protein kinase activity 1.5888E-3 2 5 1 6292
signaling 1.598E-3 2 252 2 6292
positive regulation of protein kinase activity 2.5415E-3 2 8 1 6292
signal transduction during filamentous growth 2.5415E-3 2 8 1 6292
positive regulation of kinase activity 2.5415E-3 2 8 1 6292
positive regulation of transferase activity 2.5415E-3 2 8 1 6292
reproduction 2.7096E-3 2 328 2 6292
cellular response to stimulus 3.6193E-3 2 379 2 6292
response to chemical stimulus 3.6769E-3 2 382 2 6292
MAPKKK cascade involved in osmosensory signaling pathway 4.1283E-3 2 13 1 6292
positive regulation of molecular function 5.0798E-3 2 16 1 6292
positive regulation of catalytic activity 5.0798E-3 2 16 1 6292
osmosensory signaling pathway 6.6645E-3 2 21 1 6292
MAPKKK cascade 6.6645E-3 2 21 1 6292
cellular response to abiotic stimulus 6.9813E-3 2 22 1 6292
cellular response to osmotic stress 6.9813E-3 2 22 1 6292
signal transmission via phosphorylation event 7.6148E-3 2 24 1 6292
intracellular protein kinase cascade 7.6148E-3 2 24 1 6292
regulation of kinase activity 8.248E-3 2 26 1 6292
regulation of protein kinase activity 8.248E-3 2 26 1 6292
regulation of transferase activity 8.248E-3 2 26 1 6292
regulation of phosphorylation 9.8303E-3 2 31 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

MAP-kinase scaffold activity 6.3568E-4 2 2 1 6292
protein complex scaffold 6.3568E-4 2 2 1 6292
receptor signaling complex scaffold activity 6.3568E-4 2 2 1 6292
SAM domain binding 9.5344E-4 2 3 1 6292
protein domain specific binding 1.2712E-3 2 4 1 6292
MAP kinase kinase kinase activity 1.9064E-3 2 6 1 6292
protein binding 9.4468E-3 2 612 2 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle