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View Protein Complex Details

Complex Overview

From Publication: Ho Y. et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature. 2002 Jan 10;415(6868):180-3.
Notes: This molecular complex record represents a population of complexes co-purified by immunoprecipitation of FLAG-tagged Vps21. The topolgies of protein complexes in this experiment are unknown.
Complex Size: 5 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

late endosome 3.6944E-7 5 22 3 6292
endosome 3.1606E-5 5 94 3 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

protein targeting to vacuole 1.2428E-5 5 69 3 6292
endocytosis 2.5912E-5 5 88 3 6292
membrane invagination 3.1606E-5 5 94 3 6292
vesicle-mediated transport 4.0131E-5 5 340 4 6292
vacuolar transport 5.7922E-5 5 115 3 6292
cellular membrane organization 2.9296E-4 5 198 3 6292
membrane organization 2.9296E-4 5 198 3 6292
protein targeting 4.8656E-4 5 235 3 6292
intracellular protein transport 6.1924E-4 5 255 3 6292
protein transport 7.2488E-4 5 269 3 6292
establishment of protein localization 7.4087E-4 5 271 3 6292
cellular protein localization 7.6528E-4 5 274 3 6292
cellular macromolecule localization 8.504E-4 5 284 3 6292
protein localization 1.0286E-3 5 303 3 6292
macromolecule localization 2.2656E-3 5 397 3 6292
osmosensory signaling pathway via Sho1 osmosensor 2.3825E-3 5 3 1 6292
transport 2.7399E-3 5 997 4 6292
establishment of localization 2.8585E-3 5 1008 4 6292
localization 3.47E-3 5 1060 4 6292
activation of MAPKK activity 3.9682E-3 5 5 1 6292
activation of protein kinase activity 3.9682E-3 5 5 1 6292
intracellular transport 5.9002E-3 5 553 3 6292
signal transduction during filamentous growth 6.3431E-3 5 8 1 6292
positive regulation of protein kinase activity 6.3431E-3 5 8 1 6292
positive regulation of kinase activity 6.3431E-3 5 8 1 6292
positive regulation of transferase activity 6.3431E-3 5 8 1 6292
establishment of localization in cell 7.4143E-3 5 599 3 6292
cellular localization 9.0715E-3 5 643 3 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

GTPase activity 8.5535E-6 5 61 3 6292
Rab GDP-dissociation inhibitor activity 7.9466E-4 5 1 1 6292
nucleoside-triphosphatase activity 1.3094E-3 5 329 3 6292
GDP-dissociation inhibitor activity 1.5888E-3 5 2 1 6292
hydrolase activity, acting on acid anhydrides 1.6087E-3 5 353 3 6292
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 1.6087E-3 5 353 3 6292
pyrophosphatase activity 1.6087E-3 5 353 3 6292
SAM domain binding 2.3825E-3 5 3 1 6292
protein domain specific binding 3.1756E-3 5 4 1 6292
MAP kinase kinase kinase activity 4.7604E-3 5 6 1 6292

YRC Informatics Platform - Version 3.0
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