| From Publication: | Ho Y. et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature. 2002 Jan 10;415(6868):180-3. |
| Notes: | This molecular complex record represents a population of complexes co-purified by immunoprecipitation of FLAG-tagged Rsp5. The topolgies of protein complexes in this experiment are unknown. |
| Complex Size: | 12 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| DNA-directed RNA polymerase II, core complex | 3.7251E-9 | 12 | 12 | 4 | 6292 |
| DNA-directed RNA polymerase complex | 2.3225E-7 | 12 | 31 | 4 | 6292 |
| RNA polymerase complex | 2.3225E-7 | 12 | 31 | 4 | 6292 |
| nuclear DNA-directed RNA polymerase complex | 2.3225E-7 | 12 | 31 | 4 | 6292 |
| DNA-directed RNA polymerase II, holoenzyme | 2.6426E-6 | 12 | 56 | 4 | 6292 |
| DNA-directed RNA polymerase I complex | 2.9963E-4 | 12 | 14 | 2 | 6292 |
| DNA-directed RNA polymerase III complex | 4.4637E-4 | 12 | 17 | 2 | 6292 |
| nucleoplasm part | 8.6718E-4 | 12 | 245 | 4 | 6292 |
| nucleoplasm | 1.1483E-3 | 12 | 264 | 4 | 6292 |
| plasma membrane | 1.2148E-3 | 12 | 268 | 4 | 6292 |
| ubiquitin ligase complex | 2.8832E-3 | 12 | 43 | 2 | 6292 |
| nucleolar part | 3.1543E-3 | 12 | 45 | 2 | 6292 |
| nuclear lumen | 8.2402E-3 | 12 | 453 | 4 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| protein polyubiquitination | 6.8633E-4 | 12 | 21 | 2 | 6292 |
| protein monoubiquitination | 8.2512E-4 | 12 | 23 | 2 | 6292 |
| transcription from RNA polymerase I promoter | 1.4082E-3 | 12 | 30 | 2 | 6292 |
| farnesyl diphosphate biosynthetic process, mevalonate pathway | 1.9072E-3 | 12 | 1 | 1 | 6292 |
| transcription from RNA polymerase III promoter | 2.2566E-3 | 12 | 38 | 2 | 6292 |
| transcription | 2.3988E-3 | 12 | 552 | 5 | 6292 |
| transcription from RNA polymerase II promoter | 2.7777E-3 | 12 | 335 | 4 | 6292 |
| terpenoid metabolic process | 3.811E-3 | 12 | 2 | 1 | 6292 |
| terpenoid biosynthetic process | 3.811E-3 | 12 | 2 | 1 | 6292 |
| farnesyl diphosphate biosynthetic process | 3.811E-3 | 12 | 2 | 1 | 6292 |
| farnesyl diphosphate metabolic process | 3.811E-3 | 12 | 2 | 1 | 6292 |
| prenol metabolic process | 5.7116E-3 | 12 | 3 | 1 | 6292 |
| prenol biosynthetic process | 5.7116E-3 | 12 | 3 | 1 | 6292 |
| polyprenol metabolic process | 5.7116E-3 | 12 | 3 | 1 | 6292 |
| polyprenol biosynthetic process | 5.7116E-3 | 12 | 3 | 1 | 6292 |
| protein ubiquitination | 6.4883E-3 | 12 | 65 | 2 | 6292 |
| secondary metabolic process | 9.5026E-3 | 12 | 5 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| RNA polymerase activity | 3.4126E-7 | 12 | 34 | 4 | 6292 |
| DNA-directed RNA polymerase activity | 3.4126E-7 | 12 | 34 | 4 | 6292 |
| nucleotidyltransferase activity | 2.0532E-4 | 12 | 168 | 4 | 6292 |
| transferase activity, transferring phosphorus-containing groups | 6.2986E-3 | 12 | 420 | 4 | 6292 |
| inorganic phosphate transmembrane transporter activity | 9.5026E-3 | 12 | 5 | 1 | 6292 |