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View Protein Complex Details

Complex Overview

From Publication: Ho Y. et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature. 2002 Jan 10;415(6868):180-3.
Notes: This molecular complex record represents a population of complexes co-purified by immunoprecipitation of FLAG-tagged Hpr5. The topolgies of protein complexes in this experiment are unknown.
Complex Size: 4 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

COPII vesicle coat 5.0773E-3 4 8 1 6292
ER to Golgi transport vesicle membrane 5.0773E-3 4 8 1 6292
transport vesicle membrane 9.5041E-3 4 15 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

response to DNA damage stimulus 7.9954E-3 4 236 2 6292
DNA damage response, signal transduction 8.8726E-3 4 14 1 6292
DNA damage checkpoint 8.8726E-3 4 14 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

phosphomannomutase activity 6.3573E-4 4 1 1 6292
intramolecular transferase activity, phosphotransferases 4.4437E-3 4 7 1 6292
intramolecular transferase activity 9.5041E-3 4 15 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle