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View Protein Complex Details

Complex Overview

From Publication: Ho Y. et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature. 2002 Jan 10;415(6868):180-3.
Notes: This molecular complex record represents a population of complexes co-purified by immunoprecipitation of FLAG-tagged Yrb2. The topolgies of protein complexes in this experiment are unknown.
Complex Size: 3 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

seryl-tRNA aminoacylation 9.5344E-4 3 2 1 6292
cellular amino acid metabolic process 2.9239E-3 3 199 2 6292
purine ribonucleoside salvage 3.3344E-3 3 7 1 6292
nucleoside biosynthetic process 3.3344E-3 3 7 1 6292
purine ribonucleoside biosynthetic process 3.3344E-3 3 7 1 6292
ribosomal small subunit export from nucleus 3.3344E-3 3 7 1 6292
purine nucleoside biosynthetic process 3.3344E-3 3 7 1 6292
ribonucleoside biosynthetic process 3.3344E-3 3 7 1 6292
nucleoside salvage 3.3344E-3 3 7 1 6292
cellular amine metabolic process 3.6317E-3 3 222 2 6292
amine metabolic process 4.3431E-3 3 243 2 6292
cellular amino acid and derivative metabolic process 4.3431E-3 3 243 2 6292
purine salvage 4.7611E-3 3 10 1 6292
indolalkylamine biosynthetic process 5.7116E-3 3 12 1 6292
tryptophan metabolic process 5.7116E-3 3 12 1 6292
indole and derivative metabolic process 5.7116E-3 3 12 1 6292
indole derivative metabolic process 5.7116E-3 3 12 1 6292
indole derivative biosynthetic process 5.7116E-3 3 12 1 6292
tryptophan biosynthetic process 5.7116E-3 3 12 1 6292
indolalkylamine metabolic process 5.7116E-3 3 12 1 6292
'de novo' pyrimidine base biosynthetic process 6.1865E-3 3 13 1 6292
purine ribonucleoside metabolic process 7.136E-3 3 15 1 6292
histidine biosynthetic process 7.6106E-3 3 16 1 6292
purine nucleoside metabolic process 7.6106E-3 3 16 1 6292
histidine metabolic process 7.6106E-3 3 16 1 6292
pyrimidine base biosynthetic process 7.6106E-3 3 16 1 6292
histidine family amino acid metabolic process 7.6106E-3 3 16 1 6292
histidine family amino acid biosynthetic process 7.6106E-3 3 16 1 6292
'de novo' IMP biosynthetic process 7.6106E-3 3 16 1 6292
IMP biosynthetic process 8.0849E-3 3 17 1 6292
IMP metabolic process 8.0849E-3 3 17 1 6292
carboxylic acid metabolic process 8.0851E-3 3 333 2 6292
organic acid metabolic process 8.0851E-3 3 333 2 6292
oxoacid metabolic process 8.0851E-3 3 333 2 6292
pyrimidine base metabolic process 8.5592E-3 3 18 1 6292
aromatic amino acid family biosynthetic process 8.5592E-3 3 18 1 6292
chorismate metabolic process 8.5592E-3 3 18 1 6292
cellular ketone metabolic process 8.7172E-3 3 346 2 6292
purine ribonucleoside monophosphate biosynthetic process 9.0332E-3 3 19 1 6292
ribonucleoside metabolic process 9.0332E-3 3 19 1 6292
ribonucleoside monophosphate biosynthetic process 9.5071E-3 3 20 1 6292
purine nucleoside monophosphate biosynthetic process 9.5071E-3 3 20 1 6292
cellular biogenic amine biosynthetic process 9.5071E-3 3 20 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

serine-tRNA ligase activity 9.5344E-4 3 2 1 6292
ribose phosphate diphosphokinase activity 2.8585E-3 3 6 1 6292
diphosphotransferase activity 4.2857E-3 3 9 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle