| From Publication: | Ho Y. et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature. 2002 Jan 10;415(6868):180-3. |
| Notes: | This molecular complex record represents a population of complexes co-purified by immunoprecipitation of FLAG-tagged Rpc40. The topolgies of protein complexes in this experiment are unknown. |
| Complex Size: | 7 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| DNA-directed RNA polymerase I complex | 5.3495E-10 | 7 | 14 | 4 | 6292 |
| RNA polymerase complex | 1.6706E-8 | 7 | 31 | 4 | 6292 |
| nuclear DNA-directed RNA polymerase complex | 1.6706E-8 | 7 | 31 | 4 | 6292 |
| DNA-directed RNA polymerase complex | 1.6706E-8 | 7 | 31 | 4 | 6292 |
| nucleolar part | 7.8686E-8 | 7 | 45 | 4 | 6292 |
| nucleolus | 8.0465E-7 | 7 | 211 | 5 | 6292 |
| nuclear lumen | 3.5214E-5 | 7 | 453 | 5 | 6292 |
| DNA-directed RNA polymerase III complex | 1.4316E-4 | 7 | 17 | 2 | 6292 |
| organelle lumen | 2.1944E-4 | 7 | 660 | 5 | 6292 |
| intracellular organelle lumen | 2.1944E-4 | 7 | 660 | 5 | 6292 |
| membrane-enclosed lumen | 2.9135E-4 | 7 | 700 | 5 | 6292 |
| Golgi-associated vesicle | 8.1111E-4 | 7 | 40 | 2 | 6292 |
| organelle part | 8.2061E-4 | 7 | 2282 | 7 | 6292 |
| intracellular organelle part | 8.2061E-4 | 7 | 2282 | 7 | 6292 |
| non-membrane-bounded organelle | 1.3072E-3 | 7 | 959 | 5 | 6292 |
| intracellular non-membrane-bounded organelle | 1.3072E-3 | 7 | 959 | 5 | 6292 |
| nuclear part | 2.5214E-3 | 7 | 1103 | 5 | 6292 |
| cytoplasmic vesicle | 5.6907E-3 | 7 | 107 | 2 | 6292 |
| membrane-bounded vesicle | 5.6907E-3 | 7 | 107 | 2 | 6292 |
| cytoplasmic membrane-bounded vesicle | 5.6907E-3 | 7 | 107 | 2 | 6292 |
| vesicle | 6.0062E-3 | 7 | 110 | 2 | 6292 |
| Golgi apparatus part | 7.0004E-3 | 7 | 119 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| transcription from RNA polymerase I promoter | 1.4556E-8 | 7 | 30 | 4 | 6292 |
| intra-Golgi vesicle-mediated transport | 2.4252E-4 | 7 | 22 | 2 | 6292 |
| ribosome biogenesis | 2.7556E-4 | 7 | 346 | 4 | 6292 |
| ribonucleoprotein complex biogenesis | 3.725E-4 | 7 | 374 | 4 | 6292 |
| transcription from RNA polymerase III promoter | 7.3181E-4 | 7 | 38 | 2 | 6292 |
| transcription, DNA-dependent | 1.162E-3 | 7 | 503 | 4 | 6292 |
| RNA biosynthetic process | 1.2065E-3 | 7 | 508 | 4 | 6292 |
| transcription | 1.6538E-3 | 7 | 552 | 4 | 6292 |
| ER to Golgi vesicle-mediated transport | 3.4587E-3 | 7 | 83 | 2 | 6292 |
| cellular component biogenesis | 3.9065E-3 | 7 | 694 | 4 | 6292 |
| nucleic acid metabolic process | 7.9545E-3 | 7 | 1415 | 5 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| RNA polymerase activity | 2.4595E-8 | 7 | 34 | 4 | 6292 |
| DNA-directed RNA polymerase activity | 2.4595E-8 | 7 | 34 | 4 | 6292 |
| nucleotidyltransferase activity | 1.6125E-5 | 7 | 168 | 4 | 6292 |
| transferase activity, transferring phosphorus-containing groups | 5.8266E-4 | 7 | 420 | 4 | 6292 |
| GTPase activity | 1.8819E-3 | 7 | 61 | 2 | 6292 |
| transferase activity | 6.5162E-3 | 7 | 797 | 4 | 6292 |
| catalytic activity | 7.8491E-3 | 7 | 2150 | 6 | 6292 |