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View Protein Complex Details

Complex Overview

From Publication: Gavin A.C. et al. (2006) Proteome survey reveals modularity of the yeast cell machinery. Nature. 2006 Mar 30;440(7084):631-6. Epub 2006 Jan 22.
Notes: From the published set of protein complexes (core proteins only)
Complex Size: 4 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

cytoplasmic mRNA processing body 3.1744E-5 4 15 2 6292
mRNA cap binding complex 1.9063E-3 4 3 1 6292
ribonucleoprotein complex 2.0368E-3 4 514 3 6292
RNA cap binding complex 3.8098E-3 4 6 1 6292
U6 snRNP 6.9763E-3 4 11 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

mRNA catabolic process 5.0107E-6 4 69 3 6292
RNA catabolic process 7.847E-6 4 80 3 6292
deadenylation-dependent decapping of nuclear-transcribed mRNA 1.6642E-5 4 11 2 6292
nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay 1.0585E-4 4 27 2 6292
mRNA metabolic process 1.4924E-4 4 213 3 6292
nuclear-transcribed mRNA catabolic process 2.115E-4 4 38 2 6292
cellular macromolecule catabolic process 2.8637E-4 4 265 3 6292
macromolecule catabolic process 3.9009E-4 4 294 3 6292
RNA metabolic process 5.2568E-4 4 954 4 6292
cellular catabolic process 1.084E-3 4 415 3 6292
lysyl-tRNA aminoacylation 1.2712E-3 4 2 1 6292
catabolic process 1.834E-3 4 496 3 6292
nucleic acid metabolic process 2.5494E-3 4 1415 4 6292
nucleobase, nucleoside, nucleotide and nucleic acid metabolic process 3.8261E-3 4 1566 4 6292
cellular nitrogen compound metabolic process 6.2471E-3 4 1770 4 6292
nitrogen compound metabolic process 6.5492E-3 4 1791 4 6292
regulation of translational initiation 6.9763E-3 4 11 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

lysine-tRNA ligase activity 1.2712E-3 4 2 1 6292
RNA cap binding 1.2712E-3 4 2 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle