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View Protein Complex Details

Complex Overview

From Publication: Gavin A.C. et al. (2006) Proteome survey reveals modularity of the yeast cell machinery. Nature. 2006 Mar 30;440(7084):631-6. Epub 2006 Jan 22.
Notes: From the published set of protein complexes (core proteins only)
Complex Size: 2 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

nucleotide-excision repair factor 3 complex 2.224E-3 2 7 1 6292
holo TFIIH complex 3.1764E-3 2 10 1 6292
cytoplasmic mRNA processing body 4.7627E-3 2 15 1 6292
nucleotide-excision repair complex 6.6645E-3 2 21 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

nucleotide-excision repair, DNA duplex unwinding 1.9064E-3 2 6 1 6292
regulation of transcription from RNA polymerase II promoter, mitotic 2.5415E-3 2 8 1 6292
negative regulation of transcription from RNA polymerase II promoter, mitotic 2.5415E-3 2 8 1 6292
regulation of transcription, mitotic 2.859E-3 2 9 1 6292
negative regulation of transcription, mitotic 2.859E-3 2 9 1 6292
deadenylation-dependent decapping of nuclear-transcribed mRNA 3.4937E-3 2 11 1 6292
DNA geometric change 6.3477E-3 2 20 1 6292
DNA duplex unwinding 6.3477E-3 2 20 1 6292
nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay 8.5646E-3 2 27 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

m7G(5')pppN diphosphatase activity 1.5888E-3 2 5 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle