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View Protein Complex Details

Complex Overview

From Publication: Krogan N. J. et al. (2006) Global landscape of protein complexes in the yeast Saccharomyces cerevisiae. Nature. 2006 Mar 30;440(7084):637-43. Epub 2006 Mar 22.
Notes: From the published set of core protein complex predictions.
Complex Size: 3 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

cytosol 5.9093E-3 3 284 2 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

'de novo' IMP biosynthetic process 1.8163E-5 3 16 2 6292
IMP biosynthetic process 2.0582E-5 3 17 2 6292
IMP metabolic process 2.0582E-5 3 17 2 6292
purine ribonucleoside monophosphate biosynthetic process 2.5874E-5 3 19 2 6292
ribonucleoside monophosphate biosynthetic process 2.8745E-5 3 20 2 6292
purine nucleoside monophosphate biosynthetic process 2.8745E-5 3 20 2 6292
purine ribonucleoside monophosphate metabolic process 4.1739E-5 3 24 2 6292
ribonucleoside monophosphate metabolic process 4.5363E-5 3 25 2 6292
purine nucleoside monophosphate metabolic process 4.5363E-5 3 25 2 6292
nucleoside monophosphate biosynthetic process 5.3064E-5 3 27 2 6292
nucleoside monophosphate metabolic process 7.4945E-5 3 32 2 6292
purine ribonucleotide biosynthetic process 1.2996E-4 3 42 2 6292
ribonucleotide biosynthetic process 1.4938E-4 3 45 2 6292
purine nucleotide biosynthetic process 1.7737E-4 3 49 2 6292
purine ribonucleotide metabolic process 1.9993E-4 3 52 2 6292
ribonucleotide metabolic process 2.2383E-4 3 55 2 6292
purine nucleotide metabolic process 2.4908E-4 3 58 2 6292
nucleotide biosynthetic process 3.6343E-4 3 70 2 6292
nucleobase, nucleoside, nucleotide and nucleic acid biosynthetic process 6.0142E-4 3 90 2 6292
nucleobase, nucleoside and nucleotide biosynthetic process 6.0142E-4 3 90 2 6292
nucleotide metabolic process 1.2156E-3 3 128 2 6292
nucleoside phosphate metabolic process 1.2156E-3 3 128 2 6292
nucleobase, nucleoside and nucleotide metabolic process 1.8258E-3 3 157 2 6292
heterocycle metabolic process 2.1638E-3 3 171 2 6292
cellular nitrogen compound biosynthetic process 4.4856E-3 3 247 2 6292
small molecule biosynthetic process 7.0229E-3 3 310 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

phosphoribosylaminoimidazolecarboxamide formyltransferase activity 4.5469E-7 3 3 2 6292
IMP cyclohydrolase activity 4.5469E-7 3 3 2 6292
hydroxymethyl-, formyl- and related transferase activity 3.1815E-6 3 7 2 6292
glycine hydroxymethyltransferase activity 6.8153E-6 3 10 2 6292
cyclohydrolase activity 6.8153E-6 3 10 2 6292
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines 3.8264E-5 3 23 2 6292
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds 4.7503E-4 3 80 2 6292
methyltransferase activity 6.8432E-4 3 96 2 6292
transferase activity, transferring one-carbon groups 7.2776E-4 3 99 2 6292
5'-flap endonuclease activity 2.3825E-3 3 5 1 6292
endodeoxyribonuclease activity, producing 5'-phosphomonoesters 2.3825E-3 3 5 1 6292
flap endonuclease activity 2.3825E-3 3 5 1 6292
hydrolase activity 3.0267E-3 3 911 3 6292

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