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View Protein Complex Details

Complex Overview

From Publication: Krogan N. J. et al. (2006) Global landscape of protein complexes in the yeast Saccharomyces cerevisiae. Nature. 2006 Mar 30;440(7084):637-43. Epub 2006 Mar 22.
Notes: From the published set of core protein complex predictions.
Complex Size: 7 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

retromer complex 1.5353E-15 7 6 5 6292
endosome 1.372E-8 7 94 5 6292
membrane part 8.472E-6 7 662 6 6292
endomembrane system 1.8664E-5 7 398 5 6292
protein complex 2.0393E-4 7 1137 6 6292
membrane 2.7648E-4 7 1198 6 6292
macromolecular complex 1.6651E-3 7 1635 6 6292
mitochondrial outer membrane translocase complex 9.9746E-3 7 9 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

retrograde transport, endosome to Golgi 2.9651E-12 7 19 5 6292
endosome transport 6.5693E-10 7 52 5 6292
protein retention in Golgi apparatus 2.4008E-7 7 13 3 6292
protein localization in Golgi apparatus 2.4008E-7 7 13 3 6292
maintenance of protein location in cell 1.9197E-6 7 25 3 6292
maintenance of protein location 2.169E-6 7 26 3 6292
maintenance of location in cell 2.439E-6 7 27 3 6292
maintenance of location 2.7303E-6 7 28 3 6292
intracellular transport 2.9125E-6 7 553 6 6292
establishment of localization in cell 4.682E-6 7 599 6 6292
cellular localization 7.1293E-6 7 643 6 6292
vesicle-mediated transport 8.5922E-6 7 340 5 6292
protein localization in organelle 1.0005E-5 7 149 4 6292
transport 9.4619E-5 7 997 6 6292
establishment of localization 1.009E-4 7 1008 6 6292
cellular protein localization 1.1099E-4 7 274 4 6292
cellular macromolecule localization 1.277E-4 7 284 4 6292
localization 1.3542E-4 7 1060 6 6292
protein localization 1.6444E-4 7 303 4 6292
macromolecule localization 4.6905E-4 7 397 4 6292
protein import into mitochondrial intermembrane space 8.8705E-3 7 8 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

protein transporter activity 1.1564E-9 7 58 5 6292
substrate-specific transporter activity 8.1046E-6 7 336 5 6292
transporter activity 2.0087E-5 7 404 5 6292
phosphatidylinositol-3-phosphate binding 1.7981E-4 7 19 2 6292
phosphoinositide binding 6.9367E-4 7 37 2 6292
phospholipid binding 9.3752E-4 7 43 2 6292
lipid binding 1.2671E-3 7 50 2 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle