| From Publication: | Krogan N. J. et al. (2006) Global landscape of protein complexes in the yeast Saccharomyces cerevisiae. Nature. 2006 Mar 30;440(7084):637-43. Epub 2006 Mar 22. |
| Notes: | From the published set of core protein complex predictions. |
| Complex Size: | 11 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| nuclear outer membrane | 1.8381E-7 | 11 | 86 | 5 | 6292 |
| outer membrane | 1.9364E-7 | 11 | 178 | 6 | 6292 |
| organelle outer membrane | 1.9364E-7 | 11 | 178 | 6 | 6292 |
| nuclear membrane | 3.3714E-7 | 11 | 97 | 5 | 6292 |
| nucleolus | 5.3209E-7 | 11 | 211 | 6 | 6292 |
| small nucleolar ribonucleoprotein complex | 4.8968E-6 | 11 | 72 | 4 | 6292 |
| envelope | 5.1136E-6 | 11 | 505 | 7 | 6292 |
| organelle envelope | 5.1136E-6 | 11 | 505 | 7 | 6292 |
| nuclear envelope | 1.1909E-5 | 11 | 199 | 5 | 6292 |
| nuclear membrane-endoplasmic reticulum network | 2.515E-5 | 11 | 232 | 5 | 6292 |
| organelle membrane | 4.1907E-5 | 11 | 692 | 7 | 6292 |
| nuclear lumen | 4.5591E-5 | 11 | 453 | 6 | 6292 |
| nuclear part | 8.708E-5 | 11 | 1103 | 8 | 6292 |
| intracellular organelle part | 2.8711E-4 | 11 | 2282 | 10 | 6292 |
| organelle part | 2.8711E-4 | 11 | 2282 | 10 | 6292 |
| endomembrane system | 3.3187E-4 | 11 | 398 | 5 | 6292 |
| organelle lumen | 3.7871E-4 | 11 | 660 | 6 | 6292 |
| intracellular organelle lumen | 3.7871E-4 | 11 | 660 | 6 | 6292 |
| membrane-enclosed lumen | 5.2393E-4 | 11 | 700 | 6 | 6292 |
| membrane | 1.4344E-3 | 11 | 1198 | 7 | 6292 |
| cell septum | 1.7483E-3 | 11 | 1 | 1 | 6292 |
| non-membrane-bounded organelle | 2.8626E-3 | 11 | 959 | 6 | 6292 |
| intracellular non-membrane-bounded organelle | 2.8626E-3 | 11 | 959 | 6 | 6292 |
| membrane part | 3.4146E-3 | 11 | 662 | 5 | 6292 |
| box H/ACA snoRNP complex | 3.4937E-3 | 11 | 2 | 1 | 6292 |
| nucleus | 7.2902E-3 | 11 | 2041 | 8 | 6292 |
| ribonucleoprotein complex | 9.1283E-3 | 11 | 514 | 4 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| ribosome biogenesis | 1.1028E-8 | 11 | 346 | 8 | 6292 |
| ribonucleoprotein complex biogenesis | 2.0423E-8 | 11 | 374 | 8 | 6292 |
| cellular component biogenesis | 2.5679E-6 | 11 | 694 | 8 | 6292 |
| rRNA pseudouridine synthesis | 1.6642E-5 | 11 | 4 | 2 | 6292 |
| rRNA processing | 4.8284E-5 | 11 | 128 | 4 | 6292 |
| rRNA metabolic process | 6.305E-5 | 11 | 137 | 4 | 6292 |
| pseudouridine synthesis | 9.9377E-5 | 11 | 9 | 2 | 6292 |
| ncRNA processing | 3.6214E-4 | 11 | 215 | 4 | 6292 |
| rRNA modification | 4.1874E-4 | 11 | 18 | 2 | 6292 |
| ncRNA metabolic process | 7.1489E-4 | 11 | 257 | 4 | 6292 |
| RNA processing | 3.0756E-3 | 11 | 380 | 4 | 6292 |
| RNA modification | 6.2895E-3 | 11 | 70 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| ubiquinone binding | 1.7483E-3 | 11 | 1 | 1 | 6292 |
| quinone binding | 1.7483E-3 | 11 | 1 | 1 | 6292 |