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View Protein Complex Details

Complex Overview

From Publication: Mewes, H. W. et al. MIPS: Analysis and annotation of proteins from whole genomes. Nucleic Acids Res. 32, D41-D44
Notes: MIPS hand-curated complex set. MIPS complex ID: 510.180.10.10
Complex Size: 3 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

nucleotide-excision repair factor 1 complex 2.4099E-11 3 3 3 6292
nucleotide-excision repair complex 3.2051E-8 3 21 3 6292
nuclear part 5.3751E-3 3 1103 3 6292
protein complex 5.8881E-3 3 1137 3 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

double-strand break repair via single-strand annealing, removal of nonhomologous ends 1.5158E-7 3 2 2 6292
nucleotide-excision repair, DNA incision, 5'-to lesion 1.5158E-7 3 2 2 6292
nucleotide-excision repair 2.033E-7 3 38 3 6292
nucleotide-excision repair, DNA incision 4.5469E-7 3 3 2 6292
removal of nonhomologous ends 1.5153E-6 3 5 2 6292
DNA catabolic process, endonucleolytic 2.2727E-6 3 6 2 6292
meiotic mismatch repair 5.4528E-6 3 9 2 6292
double-strand break repair via single-strand annealing 5.4528E-6 3 9 2 6292
gene conversion at mating-type locus 8.329E-6 3 11 2 6292
DNA catabolic process 1.5894E-5 3 15 2 6292
mating type switching 1.8163E-5 3 16 2 6292
DNA repair 2.7985E-5 3 192 3 6292
mating type determination 2.8745E-5 3 20 2 6292
sex determination 2.8745E-5 3 20 2 6292
cell fate commitment 3.8264E-5 3 23 2 6292
response to DNA damage stimulus 5.2124E-5 3 236 3 6292
mismatch repair 5.3064E-5 3 27 2 6292
mitotic recombination 7.9771E-5 3 33 2 6292
non-recombinational repair 8.4748E-5 3 34 2 6292
cellular response to stress 9.6946E-5 3 290 3 6292
nucleic acid phosphodiester bond hydrolysis 1.5615E-4 3 46 2 6292
cellular response to stimulus 2.1693E-4 3 379 3 6292
double-strand break repair 2.4051E-4 3 57 2 6292
meiosis I 4.6321E-4 3 79 2 6292
response to stress 4.901E-4 3 497 3 6292
DNA metabolic process 7.9998E-4 3 585 3 6292
DNA recombination 9.6474E-4 3 114 2 6292
reproductive process in single-celled organism 1.3318E-3 3 134 2 6292
cell differentiation 1.6234E-3 3 148 2 6292
reproductive developmental process 1.6895E-3 3 151 2 6292
response to stimulus 1.7981E-3 3 766 3 6292
M phase of meiotic cell cycle 1.8958E-3 3 160 2 6292
meiosis 1.8958E-3 3 160 2 6292
meiotic cell cycle 1.9912E-3 3 164 2 6292
reproductive cellular process 3.2839E-3 3 211 2 6292
reproductive process 3.3148E-3 3 212 2 6292
nucleotide-excision repair, DNA damage recognition 3.3344E-3 3 7 1 6292
reproduction of a single-celled organism 3.4715E-3 3 217 2 6292
cellular macromolecule catabolic process 5.1545E-3 3 265 2 6292
cellular developmental process 5.5854E-3 3 276 2 6292
macromolecule catabolic process 6.3267E-3 3 294 2 6292
M phase 6.3267E-3 3 294 2 6292
reproduction 7.8481E-3 3 328 2 6292
developmental process 7.9899E-3 3 331 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

single-stranded DNA specific endodeoxyribonuclease activity 3.1815E-6 3 7 2 6292
endodeoxyribonuclease activity 3.4941E-5 3 22 2 6292
deoxyribonuclease activity 6.1366E-5 3 29 2 6292
DNA binding 6.6597E-5 3 256 3 6292
endonuclease activity 2.7566E-4 3 61 2 6292
nucleic acid binding 1.1811E-3 3 666 3 6292
DNA strand annealing activity 1.9063E-3 3 4 1 6292
nuclease activity 2.9239E-3 3 199 2 6292
zinc ion binding 3.8101E-3 3 8 1 6292
damaged DNA binding 5.2364E-3 3 11 1 6292
single-stranded DNA binding 7.6106E-3 3 16 1 6292
hydrolase activity, acting on ester bonds 8.4714E-3 3 341 2 6292
binding 8.6823E-3 3 1294 3 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle