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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 4 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

endoplasmic reticulum 1.1028E-5 4 364 4 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

retrograde vesicle-mediated transport, Golgi to ER 2.4994E-7 4 26 3 6292
Golgi vesicle transport 7.3351E-5 4 168 3 6292
vesicle fusion 1.2238E-4 4 29 2 6292
vesicle organization 3.1085E-4 4 46 2 6292
organelle fusion 4.2906E-4 4 54 2 6292
vesicle-mediated transport 6.0073E-4 4 340 3 6292
membrane fusion 6.6109E-4 4 67 2 6292
cellular membrane fusion 6.6109E-4 4 67 2 6292
intracellular transport 2.525E-3 4 553 3 6292
establishment of localization in cell 3.1914E-3 4 599 3 6292
cellular localization 3.9267E-3 4 643 3 6292
membrane organization 5.6697E-3 4 198 2 6292
cellular membrane organization 5.6697E-3 4 198 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

receptor signaling protein serine/threonine kinase activity 1.8962E-4 4 36 2 6292
receptor signaling protein activity 2.0041E-4 4 37 2 6292
molecular transducer activity 9.4222E-4 4 80 2 6292
signal transducer activity 9.4222E-4 4 80 2 6292
protein serine/threonine kinase activity 1.2181E-3 4 91 2 6292
protein kinase activity 3.5467E-3 4 156 2 6292
phosphotransferase activity, alcohol group as acceptor 5.6697E-3 4 198 2 6292
kinase activity 7.0945E-3 4 222 2 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle