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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 2 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

branched chain family amino acid catabolic process 3.0316E-7 2 4 2 6292
branched chain family amino acid biosynthetic process 5.3053E-6 2 15 2 6292
branched chain family amino acid metabolic process 7.7306E-6 2 18 2 6292
cellular amino acid catabolic process 2.1979E-5 2 30 2 6292
amine catabolic process 2.6678E-5 2 33 2 6292
organic acid catabolic process 4.3504E-5 2 42 2 6292
carboxylic acid catabolic process 4.3504E-5 2 42 2 6292
cellular amino acid biosynthetic process 3.2544E-4 2 114 2 6292
amine biosynthetic process 3.7294E-4 2 122 2 6292
small molecule catabolic process 3.9158E-4 2 125 2 6292
organic acid biosynthetic process 4.846E-4 2 139 2 6292
carboxylic acid biosynthetic process 4.846E-4 2 139 2 6292
cellular amino acid metabolic process 9.9543E-4 2 199 2 6292
cellular amine metabolic process 1.2395E-3 2 222 2 6292
amine metabolic process 1.4856E-3 2 243 2 6292
cellular amino acid and derivative metabolic process 1.4856E-3 2 243 2 6292
cellular nitrogen compound biosynthetic process 1.5351E-3 2 247 2 6292
small molecule biosynthetic process 2.42E-3 2 310 2 6292
organic acid metabolic process 2.793E-3 2 333 2 6292
oxoacid metabolic process 2.793E-3 2 333 2 6292
carboxylic acid metabolic process 2.793E-3 2 333 2 6292
cellular ketone metabolic process 3.0157E-3 2 346 2 6292
cellular catabolic process 4.3405E-3 2 415 2 6292
catabolic process 6.2027E-3 2 496 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

branched-chain-amino-acid transaminase activity 5.0527E-8 2 2 2 6292
transferase activity, transferring nitrogenous groups 7.7306E-6 2 18 2 6292
transaminase activity 7.7306E-6 2 18 2 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle