YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 11 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

proteasome core complex 3.3077E-27 11 16 10 6292
proteasome complex 2.6891E-21 11 48 10 6292
proteasome core complex, alpha-subunit complex 4.2744E-21 11 7 7 6292
proteasome core complex, beta-subunit complex 1.3864E-7 11 7 3 6292
protein complex 3.3087E-7 11 1137 10 6292
macromolecular complex 1.1571E-5 11 1635 10 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

modification-dependent protein catabolic process 7.0906E-16 11 156 10 6292
ubiquitin-dependent protein catabolic process 7.0906E-16 11 156 10 6292
proteolysis involved in cellular protein catabolic process 8.6234E-16 11 159 10 6292
modification-dependent macromolecule catabolic process 1.185E-15 11 164 10 6292
cellular protein catabolic process 1.8192E-15 11 171 10 6292
proteolysis 4.7985E-15 11 188 10 6292
protein catabolic process 5.0659E-15 11 189 10 6292
cellular macromolecule catabolic process 1.578E-13 11 265 10 6292
macromolecule catabolic process 4.515E-13 11 294 10 6292
cellular catabolic process 1.4568E-11 11 415 10 6292
catabolic process 8.7117E-11 11 496 10 6292
cellular protein metabolic process 1.8871E-7 11 1074 10 6292
protein metabolic process 3.2802E-7 11 1136 10 6292
cellular macromolecule metabolic process 2.9073E-4 11 2285 10 6292
macromolecule metabolic process 3.7814E-4 11 2349 10 6292
primary metabolic process 2.7104E-3 11 2896 10 6292
cellular metabolic process 4.1594E-3 11 3033 10 6292
metabolic process 6.0149E-3 11 3157 10 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

endopeptidase activity 9.8301E-21 11 54 10 6292
peptidase activity, acting on L-amino acid peptides 4.126E-18 11 95 10 6292
peptidase activity 5.9501E-15 11 192 10 6292
hydrolase activity 3.7119E-8 11 911 10 6292
catalytic activity 1.6253E-4 11 2150 10 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle