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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 3 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

pteridine and derivative biosynthetic process 4.768E-4 3 1 1 6292
folic acid biosynthetic process 4.768E-4 3 1 1 6292
nitrogenous compound catabolic process 4.768E-4 3 1 1 6292
anaerobic purine catabolic process 4.768E-4 3 1 1 6292
acetate biosynthetic process from carbon monoxide 4.768E-4 3 1 1 6292
nucleobase catabolic process 9.5344E-4 3 2 1 6292
pteridine and derivative metabolic process 9.5344E-4 3 2 1 6292
purine base catabolic process 9.5344E-4 3 2 1 6292
folic acid metabolic process 9.5344E-4 3 2 1 6292
acetate biosynthetic process 1.9063E-3 3 4 1 6292
folic acid and derivative biosynthetic process 2.8585E-3 3 6 1 6292
acetate metabolic process 3.3344E-3 3 7 1 6292
negative regulation of translation 3.3344E-3 3 7 1 6292
folic acid and derivative metabolic process 4.2857E-3 3 9 1 6292
purine base metabolic process 7.136E-3 3 15 1 6292
negative regulation of cellular protein metabolic process 7.136E-3 3 15 1 6292
nucleobase, nucleoside, nucleotide and nucleic acid catabolic process 7.136E-3 3 15 1 6292
nucleobase, nucleoside and nucleotide catabolic process 7.136E-3 3 15 1 6292
negative regulation of protein metabolic process 7.6106E-3 3 16 1 6292
fermentation 9.5071E-3 3 20 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

methenyltetrahydrofolate cyclohydrolase activity 9.5344E-4 3 2 1 6292
methylenetetrahydrofolate dehydrogenase (NADP+) activity 9.5344E-4 3 2 1 6292
formate-tetrahydrofolate ligase activity 9.5344E-4 3 2 1 6292
methylenetetrahydrofolate dehydrogenase activity 1.4299E-3 3 3 1 6292
cyclohydrolase activity 4.7611E-3 3 10 1 6292
oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor 5.7116E-3 3 12 1 6292
oxidoreductase activity, acting on the CH-NH group of donors 6.6614E-3 3 14 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle