From Publication: | Riffle <i>et al</i>. (2010) (Unpublished Data) |
Notes: | Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7 |
Complex Size: | 13 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
DNA-directed RNA polymerase II, core complex | 7.0879E-28 | 13 | 12 | 10 | 6292 |
DNA-directed RNA polymerase II, holoenzyme | 9.0675E-25 | 13 | 56 | 12 | 6292 |
RNA polymerase complex | 4.7239E-22 | 13 | 31 | 10 | 6292 |
nuclear DNA-directed RNA polymerase complex | 4.7239E-22 | 13 | 31 | 10 | 6292 |
DNA-directed RNA polymerase complex | 4.7239E-22 | 13 | 31 | 10 | 6292 |
nucleoplasm | 9.3669E-19 | 13 | 264 | 13 | 6292 |
nucleoplasm part | 1.1723E-16 | 13 | 245 | 12 | 6292 |
nuclear lumen | 1.1883E-15 | 13 | 453 | 13 | 6292 |
organelle lumen | 1.6732E-13 | 13 | 660 | 13 | 6292 |
intracellular organelle lumen | 1.6732E-13 | 13 | 660 | 13 | 6292 |
membrane-enclosed lumen | 3.6201E-13 | 13 | 700 | 13 | 6292 |
DNA-directed RNA polymerase I complex | 3.1104E-11 | 13 | 14 | 5 | 6292 |
DNA-directed RNA polymerase III complex | 9.5835E-11 | 13 | 17 | 5 | 6292 |
nuclear part | 1.3925E-10 | 13 | 1103 | 13 | 6292 |
protein complex | 1.2542E-8 | 13 | 1137 | 12 | 6292 |
nucleolar part | 1.8366E-8 | 13 | 45 | 5 | 6292 |
nucleus | 4.29E-7 | 13 | 2041 | 13 | 6292 |
macromolecular complex | 9.1057E-7 | 13 | 1635 | 12 | 6292 |
organelle part | 1.8381E-6 | 13 | 2282 | 13 | 6292 |
intracellular organelle part | 1.8381E-6 | 13 | 2282 | 13 | 6292 |
transcription factor TFIIF complex | 1.1809E-5 | 13 | 3 | 2 | 6292 |
nucleolus | 4.1788E-5 | 13 | 211 | 5 | 6292 |
membrane-bounded organelle | 1.2767E-3 | 13 | 3771 | 13 | 6292 |
intracellular membrane-bounded organelle | 1.2767E-3 | 13 | 3771 | 13 | 6292 |
intracellular organelle | 3.4477E-3 | 13 | 4070 | 13 | 6292 |
organelle | 3.4587E-3 | 13 | 4071 | 13 | 6292 |
transcription factor complex | 9.0369E-3 | 13 | 71 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
RNA polymerase activity | 1.3948E-21 | 13 | 34 | 10 | 6292 |
DNA-directed RNA polymerase activity | 1.3948E-21 | 13 | 34 | 10 | 6292 |
nucleotidyltransferase activity | 3.7667E-14 | 13 | 168 | 10 | 6292 |
transferase activity, transferring phosphorus-containing groups | 3.7804E-10 | 13 | 420 | 10 | 6292 |
transferase activity | 2.0145E-7 | 13 | 797 | 10 | 6292 |
catalytic activity | 2.0237E-3 | 13 | 2150 | 10 | 6292 |
positive transcription elongation factor activity | 2.0661E-3 | 13 | 1 | 1 | 6292 |
general RNA polymerase II transcription factor activity | 7.3913E-3 | 13 | 64 | 2 | 6292 |