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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 4 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

spliceosomal complex 2.2837E-9 4 45 4 6292
ribonucleoprotein complex 4.4059E-5 4 514 4 6292
nuclear part 9.4015E-4 4 1103 4 6292
macromolecular complex 4.5471E-3 4 1635 4 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

RNA processing 8.3529E-4 4 380 3 6292
nuclear mRNA splicing, via spliceosome 1.4406E-3 4 99 2 6292
RNA splicing, via transesterification reactions with bulged adenosine as nucleophile 1.4697E-3 4 100 2 6292
RNA splicing, via transesterification reactions 1.6812E-3 4 107 2 6292
RNA splicing 2.5495E-3 4 132 2 6292
mRNA processing 3.5467E-3 4 156 2 6292
mRNA metabolic process 6.5424E-3 4 213 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle