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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 6 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

ribonucleoprotein complex 1.9994E-5 6 514 5 6292
90S preribosome 1.0242E-4 6 17 2 6292
preribosome 4.1945E-4 6 34 2 6292
cytosolic small ribosomal subunit 5.2472E-4 6 38 2 6292
small ribosomal subunit 1.9326E-3 6 73 2 6292
nuclear outer membrane 2.6729E-3 6 86 2 6292
nuclear membrane 3.389E-3 6 97 2 6292
cytosolic ribosome 3.6696E-3 6 101 2 6292
cytosolic part 5.3155E-3 6 122 2 6292
macromolecular complex 5.5477E-3 6 1635 5 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

maturation of SSU-rRNA 1.2657E-3 6 59 2 6292
cellular macromolecule metabolic process 2.2844E-3 6 2285 6 6292
macromolecule metabolic process 2.6967E-3 6 2349 6 6292
ribosome biogenesis 2.9111E-3 6 346 3 6292
ribonucleoprotein complex biogenesis 3.641E-3 6 374 3 6292
translation 3.6971E-3 6 376 3 6292
traversing start control point of mitotic cell cycle 5.7102E-3 6 6 1 6292
rRNA processing 5.8384E-3 6 128 2 6292
poly(A)+ mRNA export from nucleus 6.6592E-3 6 7 1 6292
response to exogenous dsRNA 6.6592E-3 6 7 1 6292
response to dsRNA 6.6592E-3 6 7 1 6292
rRNA metabolic process 6.6661E-3 6 137 2 6292
primary metabolic process 9.4808E-3 6 2896 6 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

5'-3' exoribonuclease activity 1.9064E-3 6 2 1 6292
recombinase activity 3.8098E-3 6 4 1 6292
5'-3' exonuclease activity 5.7102E-3 6 6 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle