| From Publication: | Riffle <i>et al</i>. (2010) (Unpublished Data) |
| Notes: | Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7 |
| Complex Size: | 4 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| small nucleolar ribonucleoprotein complex | 5.7017E-6 | 4 | 72 | 3 | 6292 |
| nuclear outer membrane | 9.7674E-6 | 4 | 86 | 3 | 6292 |
| nuclear membrane | 1.4053E-5 | 4 | 97 | 3 | 6292 |
| ribonucleoprotein complex | 4.4059E-5 | 4 | 514 | 4 | 6292 |
| outer membrane | 8.7226E-5 | 4 | 178 | 3 | 6292 |
| organelle outer membrane | 8.7226E-5 | 4 | 178 | 3 | 6292 |
| nuclear envelope | 1.2179E-4 | 4 | 199 | 3 | 6292 |
| nucleolus | 1.4509E-4 | 4 | 211 | 3 | 6292 |
| nuclear membrane-endoplasmic reticulum network | 1.9262E-4 | 4 | 232 | 3 | 6292 |
| nucleolar part | 2.974E-4 | 4 | 45 | 2 | 6292 |
| endomembrane system | 9.5789E-4 | 4 | 398 | 3 | 6292 |
| box C/D snoRNP complex | 1.2712E-3 | 4 | 2 | 1 | 6292 |
| box H/ACA snoRNP complex | 1.2712E-3 | 4 | 2 | 1 | 6292 |
| nuclear lumen | 1.404E-3 | 4 | 453 | 3 | 6292 |
| envelope | 1.9337E-3 | 4 | 505 | 3 | 6292 |
| organelle envelope | 1.9337E-3 | 4 | 505 | 3 | 6292 |
| organelle lumen | 4.2376E-3 | 4 | 660 | 3 | 6292 |
| intracellular organelle lumen | 4.2376E-3 | 4 | 660 | 3 | 6292 |
| membrane part | 4.2752E-3 | 4 | 662 | 3 | 6292 |
| macromolecular complex | 4.5471E-3 | 4 | 1635 | 4 | 6292 |
| organelle membrane | 4.8652E-3 | 4 | 692 | 3 | 6292 |
| membrane-enclosed lumen | 5.0309E-3 | 4 | 700 | 3 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| rRNA modification | 7.8517E-8 | 4 | 18 | 3 | 6292 |
| RNA modification | 5.2345E-6 | 4 | 70 | 3 | 6292 |
| ribosome biogenesis | 8.9951E-6 | 4 | 346 | 4 | 6292 |
| ribonucleoprotein complex biogenesis | 1.2296E-5 | 4 | 374 | 4 | 6292 |
| rRNA processing | 3.2416E-5 | 4 | 128 | 3 | 6292 |
| rRNA metabolic process | 3.9765E-5 | 4 | 137 | 3 | 6292 |
| cellular component biogenesis | 1.4687E-4 | 4 | 694 | 4 | 6292 |
| ncRNA processing | 1.5347E-4 | 4 | 215 | 3 | 6292 |
| ncRNA metabolic process | 2.6137E-4 | 4 | 257 | 3 | 6292 |
| maturation of SSU-rRNA | 5.1246E-4 | 4 | 59 | 2 | 6292 |
| RNA processing | 8.3529E-4 | 4 | 380 | 3 | 6292 |
| gene expression | 1.7224E-3 | 4 | 1283 | 4 | 6292 |
| rRNA pseudouridine synthesis | 2.5411E-3 | 4 | 4 | 1 | 6292 |
| macromolecule modification | 2.7453E-3 | 4 | 569 | 3 | 6292 |
| snoRNA 3'-end processing | 3.1756E-3 | 4 | 5 | 1 | 6292 |
| snoRNA processing | 4.4437E-3 | 4 | 7 | 1 | 6292 |
| pseudouridine synthesis | 5.7106E-3 | 4 | 9 | 1 | 6292 |
| ncRNA 3'-end processing | 7.6087E-3 | 4 | 12 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| pseudouridylate synthase activity | 3.1756E-3 | 4 | 5 | 1 | 6292 |