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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 4 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

eukaryotic translation initiation factor 4F complex 2.5411E-3 4 4 1 6292
nuclear exosome (RNase complex) 9.5041E-3 4 15 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

termination of RNA polymerase II transcription, poly(A)-independent 1.0898E-5 4 9 2 6292
termination of RNA polymerase II transcription 5.1654E-5 4 19 2 6292
transcription termination 6.3408E-5 4 21 2 6292
cellular protein complex disassembly 2.2288E-4 4 39 2 6292
protein complex disassembly 2.2288E-4 4 39 2 6292
cellular macromolecular complex disassembly 2.3456E-4 4 40 2 6292
macromolecular complex disassembly 2.3456E-4 4 40 2 6292
cellular component disassembly 2.8424E-4 4 44 2 6292
cellular macromolecular complex subunit organization 9.5855E-3 4 259 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

poly-purine tract binding 3.1756E-3 4 5 1 6292
poly(A) RNA binding 3.1756E-3 4 5 1 6292
single-stranded RNA binding 3.1756E-3 4 5 1 6292
nucleic acid binding 4.351E-3 4 666 3 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle