| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.099] [SVM Score: 0.420606987365] |
| Complex Size: | 2 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| retrotransposon nucleocapsid | 4.3024E-4 | 2 | 131 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| DNA integration | 3.1786E-4 | 2 | 1 | 1 | 6292 |
| viral procapsid maturation | 3.1786E-4 | 2 | 1 | 1 | 6292 |
| viral assembly, maturation, egress, and release | 3.1786E-4 | 2 | 1 | 1 | 6292 |
| viral reproduction | 3.1786E-4 | 2 | 1 | 1 | 6292 |
| viral capsid assembly | 3.1786E-4 | 2 | 1 | 1 | 6292 |
| virion assembly | 3.1786E-4 | 2 | 1 | 1 | 6292 |
| developmental maturation | 3.1786E-4 | 2 | 1 | 1 | 6292 |
| viral reproductive process | 3.1786E-4 | 2 | 1 | 1 | 6292 |
| cellular component assembly involved in morphogenesis | 3.1786E-4 | 2 | 1 | 1 | 6292 |
| viral infectious cycle | 3.1786E-4 | 2 | 1 | 1 | 6292 |
| transposition, RNA-mediated | 4.4352E-4 | 2 | 133 | 2 | 6292 |
| transposition | 4.987E-4 | 2 | 141 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.