| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.069] [SVM Score: 0.544520549133] |
| Complex Size: | 2 proteins |
| Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
| COX5A |
|
|
|
| NDI1 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| mitochondrial respiratory chain complex IV | 3.811E-3 | 2 | 12 | 1 | 6292 |
| respiratory chain complex IV | 3.811E-3 | 2 | 12 | 1 | 6292 |
| mitochondrial part | 5.6881E-3 | 2 | 475 | 2 | 6292 |
| mitochondrial respiratory chain | 8.248E-3 | 2 | 26 | 1 | 6292 |
| respiratory chain | 8.248E-3 | 2 | 26 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| NADH dehydrogenase (ubiquinone) activity | 3.1786E-4 | 2 | 1 | 1 | 6292 |
| NADH dehydrogenase (quinone) activity | 3.1786E-4 | 2 | 1 | 1 | 6292 |
| oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor | 6.3568E-4 | 2 | 2 | 1 | 6292 |
| NADH dehydrogenase activity | 9.5344E-4 | 2 | 3 | 1 | 6292 |
| oxidoreductase activity | 1.9877E-3 | 2 | 281 | 2 | 6292 |
| heme-copper terminal oxidase activity | 3.811E-3 | 2 | 12 | 1 | 6292 |
| cytochrome-c oxidase activity | 3.811E-3 | 2 | 12 | 1 | 6292 |
| oxidoreductase activity, acting on heme group of donors | 3.811E-3 | 2 | 12 | 1 | 6292 |
| oxidoreductase activity, acting on heme group of donors, oxygen as acceptor | 3.811E-3 | 2 | 12 | 1 | 6292 |
| oxidoreductase activity, acting on NADH or NADPH | 6.6645E-3 | 2 | 21 | 1 | 6292 |