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Protein Overview: GCD7

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run ZDS1 Sample 2- cpn2 from june 2005 McCusker D, et al (2007)
View Run ZDS1 Sample 3 - cpn + atp, from june 2005 McCusker D, et al (2007)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data GCD7 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..137] MSA 1.066988 View MSA. Confident ab initio structure predictions are available.
2 View Details [138..311]
[376..381]
ORFEUS 10.68 D-ribose-5-phosphate isomerase (RpiA), catalytic domain; D-ribose-5-phosphate isomerase (RpiA), lid domain
3 View Details [312..375] ORFEUS 10.68 D-ribose-5-phosphate isomerase (RpiA), catalytic domain; D-ribose-5-phosphate isomerase (RpiA), lid domain

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • translation initiation factor activity
  • 10.1099993541596 bayes_pls_golite062009
  • translation regulator activity
  • 5.74669335554405 bayes_pls_golite062009
  • nucleic acid binding
  • 2.17718456512191 bayes_pls_golite062009
  • transcription regulator activity
  • 1.9283980201455 bayes_pls_golite062009
  • DNA binding
  • 1.55389679363348 bayes_pls_golite062009
  • binding
  • 1.53908996868286 bayes_pls_golite062009
  • catalytic activity
  • 1.31732715713197 bayes_pls_golite062009
  • translation factor activity, nucleic acid binding
  • 1.09424756417577 bayes_pls_golite062009
  • transcription factor activity
  • 0.995059566132783 bayes_pls_golite062009
  • CoA-transferase activity
  • 0.0320953696548698 bayes_pls_golite062009
  • protein binding
  • 0.0293610121675921 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle