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Protein Overview: SLX8

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run ASF1 sample 3928 - Asf1-S-TEV-ZZ (in hir3delta mutant) Green EM, et al (2005)
View Run MLP2 #14 Mitotic Prep2-TiO2 Flowthrough Keck JM, et al. (2011)

Yeast Two-Hybrid Data

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data SLX8 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..198] MSA 1.974995 View MSA. No confident structure predictions are available.
2 View Details [199..274] PSI-BLAST 42.30103 brca1 RING domain

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2
Term Confidence Notes
  • ubiquitin-protein ligase activity
  • 10.2497392096259 bayes_pls_golite062009
  • small conjugating protein ligase activity
  • 10.0460587929138 bayes_pls_golite062009
  • acid-amino acid ligase activity
  • 8.99384576623969 bayes_pls_golite062009
  • ligase activity, forming carbon-nitrogen bonds
  • 7.6988425139962 bayes_pls_golite062009
  • ligase activity
  • 3.92677358871643 bayes_pls_golite062009
  • binding
  • 2.58862749918018 bayes_pls_golite062009
  • protein binding
  • 1.49775478023418 bayes_pls_golite062009
  • small conjugating protein-specific protease activity
  • 1.2126425713931 bayes_pls_golite062009
  • ubiquitin-specific protease activity
  • 1.03469202541773 bayes_pls_golite062009
  • transcription regulator activity
  • 0.919313413645213 bayes_pls_golite062009
  • nucleic acid binding
  • 0.894017701424745 bayes_pls_golite062009
  • DNA binding
  • 0.588609879350932 bayes_pls_golite062009
  • cysteine-type peptidase activity
  • 0.50197530717959 bayes_pls_golite062009
  • ubiquitin thiolesterase activity
  • 0.265769062717221 bayes_pls_golite062009
  • transcription factor binding
  • 0.14168789797081 bayes_pls_golite062009
  • catalytic activity
  • 0.14112008370434 bayes_pls_golite062009




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle