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Protein Overview: DPB4

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run TID3 No Comments Cheeseman IM, et al. (2002)
View Run CEP3 sample cbf3 from feb 2005 Sandall S, et all (2006)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data DPB4 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..34]
[61..127]
PSI-BLAST 28.0 Negative cofactor 2, NC2, beta chain
2 View Details [35..60]
[128..196]
PSI-BLAST 28.0 Negative cofactor 2, NC2, beta chain

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • DNA-directed DNA polymerase activity
  • 7.30463919195401 bayes_pls_golite062009
  • DNA polymerase activity
  • 7.25909396656216 bayes_pls_golite062009
  • nucleotidyltransferase activity
  • 4.91761894051618 bayes_pls_golite062009
  • DNA binding
  • 4.49118409263799 bayes_pls_golite062009
  • nucleic acid binding
  • 4.35201412176948 bayes_pls_golite062009
  • transcription regulator activity
  • 4.08606081850613 bayes_pls_golite062009
  • general RNA polymerase II transcription factor activity
  • 4.04353148658823 bayes_pls_golite062009
  • binding
  • 3.27510691458843 bayes_pls_golite062009
  • transcription factor activity
  • 2.51581622888695 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
  • 2.38228606466152 bayes_pls_golite062009
  • transcription repressor activity
  • 2.3574713307436 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
  • 1.71244156762178 bayes_pls_golite062009
  • transferase activity
  • 1.4922191078713 bayes_pls_golite062009
  • transcription corepressor activity
  • 1.30859203490073 bayes_pls_golite062009
  • transcription activator activity
  • 1.25487495162413 bayes_pls_golite062009
  • transcription factor binding
  • 1.15204005455906 bayes_pls_golite062009
  • transcription coactivator activity
  • 1.1297723528047 bayes_pls_golite062009
  • protein binding
  • 1.07873333188144 bayes_pls_golite062009
  • transcription cofactor activity
  • 1.01502031330902 bayes_pls_golite062009
  • centromeric DNA binding
  • 0.6937627559147 bayes_pls_golite062009
  • sequence-specific DNA binding
  • 0.0852726470007639 bayes_pls_golite062009
    2 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle