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View Protein Complex Details

Complex Overview

From Publication: Ho Y. et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature. 2002 Jan 10;415(6868):180-3.
Notes: This molecular complex record represents a population of complexes co-purified by immunoprecipitation of FLAG-tagged Rad10. The topolgies of protein complexes in this experiment are unknown.
Complex Size: 2 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

nucleotide-excision repair factor 1 complex 1.5158E-7 2 3 2 6292
nucleotide-excision repair complex 1.0611E-5 2 21 2 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

double-strand break repair via single-strand annealing, removal of nonhomologous ends 5.0527E-8 2 2 2 6292
nucleotide-excision repair, DNA incision, 5'-to lesion 5.0527E-8 2 2 2 6292
nucleotide-excision repair, DNA incision 1.5158E-7 2 3 2 6292
removal of nonhomologous ends 5.0527E-7 2 5 2 6292
DNA catabolic process, endonucleolytic 7.579E-7 2 6 2 6292
meiotic mismatch repair 1.819E-6 2 9 2 6292
double-strand break repair via single-strand annealing 1.819E-6 2 9 2 6292
gene conversion at mating-type locus 2.779E-6 2 11 2 6292
DNA catabolic process 5.3053E-6 2 15 2 6292
mating type switching 6.0632E-6 2 16 2 6292
mating type determination 9.6001E-6 2 20 2 6292
sex determination 9.6001E-6 2 20 2 6292
cell fate commitment 1.2783E-5 2 23 2 6292
mismatch repair 1.7735E-5 2 27 2 6292
mitotic recombination 2.6678E-5 2 33 2 6292
non-recombinational repair 2.8346E-5 2 34 2 6292
nucleotide-excision repair 3.552E-5 2 38 2 6292
nucleic acid phosphodiester bond hydrolysis 5.2295E-5 2 46 2 6292
double-strand break repair 8.0641E-5 2 57 2 6292
meiosis I 1.5567E-4 2 79 2 6292
DNA recombination 3.2544E-4 2 114 2 6292
reproductive process in single-celled organism 4.5024E-4 2 134 2 6292
cell differentiation 5.4963E-4 2 148 2 6292
reproductive developmental process 5.7222E-4 2 151 2 6292
M phase of meiotic cell cycle 6.427E-4 2 160 2 6292
meiosis 6.427E-4 2 160 2 6292
meiotic cell cycle 6.7534E-4 2 164 2 6292
DNA repair 9.2646E-4 2 192 2 6292
reproductive cellular process 1.1194E-3 2 211 2 6292
reproductive process 1.1301E-3 2 212 2 6292
reproduction of a single-celled organism 1.1841E-3 2 217 2 6292
response to DNA damage stimulus 1.4011E-3 2 236 2 6292
cellular macromolecule catabolic process 1.7674E-3 2 265 2 6292
cellular developmental process 1.9175E-3 2 276 2 6292
cellular response to stress 2.1173E-3 2 290 2 6292
macromolecule catabolic process 2.1762E-3 2 294 2 6292
M phase 2.1762E-3 2 294 2 6292
reproduction 2.7096E-3 2 328 2 6292
developmental process 2.7595E-3 2 331 2 6292
cell cycle phase 3.5621E-3 2 376 2 6292
cellular response to stimulus 3.6193E-3 2 379 2 6292
cellular catabolic process 4.3405E-3 2 415 2 6292
cell cycle process 6.0534E-3 2 490 2 6292
catabolic process 6.2027E-3 2 496 2 6292
response to stress 6.2277E-3 2 497 2 6292
cell cycle 6.95E-3 2 525 2 6292
DNA metabolic process 8.631E-3 2 585 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

single-stranded DNA specific endodeoxyribonuclease activity 1.0611E-6 2 7 2 6292
endodeoxyribonuclease activity 1.1672E-5 2 22 2 6292
deoxyribonuclease activity 2.0514E-5 2 29 2 6292
endonuclease activity 9.2464E-5 2 61 2 6292
nuclease activity 9.9543E-4 2 199 2 6292
DNA strand annealing activity 1.2712E-3 2 4 1 6292
DNA binding 1.6492E-3 2 256 2 6292
hydrolase activity, acting on ester bonds 2.929E-3 2 341 2 6292
single-stranded DNA binding 5.0798E-3 2 16 1 6292
double-stranded DNA binding 7.2981E-3 2 23 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle