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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 9 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

DNA helicase complex 1.5371E-19 9 11 7 6292
Ino80 complex 1.5371E-19 9 11 7 6292
nuclear chromatin 7.4586E-13 9 73 7 6292
chromatin 1.0996E-12 9 77 7 6292
chromatin remodeling complex 6.7651E-12 9 99 7 6292
nuclear chromosome part 7.0232E-10 9 190 7 6292
nuclear chromosome 2.5366E-9 9 228 7 6292
chromosomal part 3.3294E-9 9 237 7 6292
chromosome 9.2053E-9 9 274 7 6292
Swr1 complex 9.1317E-7 9 15 3 6292
nucleus 3.9292E-5 9 2041 9 6292
non-membrane-bounded organelle 5.0826E-5 9 959 7 6292
intracellular non-membrane-bounded organelle 5.0826E-5 9 959 7 6292
nuclear part 1.2953E-4 9 1103 7 6292
protein complex 1.5852E-4 9 1137 7 6292
macromolecular complex 1.7084E-3 9 1635 7 6292
membrane-bounded organelle 9.9391E-3 9 3771 9 6292
intracellular membrane-bounded organelle 9.9391E-3 9 3771 9 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

chromatin remodeling 1.0425E-10 9 68 6 6292
chromatin modification 2.607E-8 9 168 6 6292
chromatin organization 8.1229E-8 9 203 6 6292
chromosome organization 3.0574E-5 9 555 6 6292
organelle organization 1.6714E-3 9 1127 6 6292
regulation of transcription from RNA polymerase II promoter 3.3545E-3 9 228 3 6292
transcription from RNA polymerase II promoter 9.881E-3 9 335 3 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

ATP-dependent 5'-3' DNA helicase activity 6.7465E-11 9 7 4 6292
5'-3' DNA helicase activity 1.3484E-10 9 8 4 6292
ATP-dependent DNA helicase activity 5.8572E-9 9 18 4 6292
DNA helicase activity 8.7868E-8 9 34 4 6292
ATP-dependent helicase activity 3.6539E-7 9 48 4 6292
purine NTP-dependent helicase activity 3.6539E-7 9 48 4 6292
DNA-dependent ATPase activity 6.3758E-7 9 55 4 6292
helicase activity 3.3742E-6 9 83 4 6292
ATPase activity, coupled 3.4703E-5 9 149 4 6292
ATPase activity 1.3568E-4 9 211 4 6292
nucleoside-triphosphatase activity 7.5004E-4 9 329 4 6292
hydrolase activity, acting on acid anhydrides 9.7964E-4 9 353 4 6292
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 9.7964E-4 9 353 4 6292
pyrophosphatase activity 9.7964E-4 9 353 4 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle