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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 4 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

eukaryotic translation initiation factor 4F complex 1.8182E-6 4 4 2 6292
non-membrane-bounded organelle 5.368E-4 4 959 4 6292
intracellular non-membrane-bounded organelle 5.368E-4 4 959 4 6292
epsilon DNA polymerase complex 3.1756E-3 4 5 1 6292
DNA polymerase complex 6.3436E-3 4 10 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

translational initiation 2.5881E-4 4 42 2 6292
gene expression 1.7224E-3 4 1283 4 6292
DNA synthesis involved in DNA repair 2.5411E-3 4 4 1 6292
leading strand elongation 9.5041E-3 4 15 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

translation initiation factor activity 1.0585E-4 4 27 2 6292
nucleic acid binding 1.2452E-4 4 666 4 6292
translation factor activity, nucleic acid binding 2.8424E-4 4 44 2 6292
binding 1.7823E-3 4 1294 4 6292
zinc ion binding 5.0773E-3 4 8 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle