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Protein Overview: SC35-PA

General Information:
Name(s) found: SC35-PA / FBpp0088837 [FlyBase]
Description(s) found:
Found 20 descriptions.
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  • The gene SC35 is referred to in FlyBase by the symbol Dmel\SC35 (CG5442, FBgn0040286). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2L:12431856..12434665. It has the cytological map location 33E4. There is experimental evidence that it has the molecular function</span>: protein binding. There is experimental evidence that it is involved in the biological process</span>: regulation of alternative nuclear mRNA splicing, via spliceosome. 7 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 112 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IC][IDA]
    [NOT]omega speckle [IDA]
    nuclear speck [IDA]
    spliceosomal complex [NAS]
    chromatin [IDA]
    Biological Process: regulation of alternative nuclear mRNA splicing, via spliceosome [IMP]
    mRNA splice site selection [ISS]
    nuclear mRNA splicing, via spliceosome [ISS][NAS]
    Molecular Function: nucleotide binding [IEA]
    nucleic acid binding [IEA]
    protein binding [IPI]
    mRNA binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDGRMLDGRE LRVQMARYGR PSSPTRSSSG RRGGGGGGGS GGRRRSRSRS PMRRRSRSPR  60
   61 RRSYSRSRSP GSHSPERRSK FSRSPVRGDS RNGIGSGSGG LAPAASRSRS RS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..112] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle